Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_16655
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Entry
A4R40_16655 CDS
T05478
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plum03019
]
A4R40_16655 (rnc)
03009 Ribosome biogenesis [BR:
plum03009
]
A4R40_16655 (rnc)
03036 Chromosome and associated proteins [BR:
plum03036
]
A4R40_16655 (rnc)
Enzymes [BR:
plum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
A4R40_16655 (rnc)
Messenger RNA biogenesis [BR:
plum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
A4R40_16655 (rnc)
Ribosome biogenesis [BR:
plum03009
]
Eukaryotic type
90S particles
RNase
A4R40_16655 (rnc)
Prokaryotic type
rRNA processing factors
A4R40_16655 (rnc)
Chromosome and associated proteins [BR:
plum03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
A4R40_16655 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AWK43019
UniProt:
A0A6L9JQX3
LinkDB
All DBs
Position
complement(3967425..3968105)
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFDQYDLLIQALTHRSASSKHNERLEFLGDSILSFVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGYRRESILADTVEALI
GAIFLDSDIQSIERIILSWYETRLNEISPGDKQKDPKTRLQEYLQGHHLPLPSYLVVMVR
GEAHDQEFTIHCQVSGIEQPVKGTGSSRRKAEQAAAEQALKQLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccatcgtaattaacagattgcagcgtaagctggggtacacttttgatcagtat
gatttgctgatacaagcgttaactcatcgtagtgccagcagtaaacataatgagcggctg
gaatttcttggtgactcaatcctgagttttgttattgccaatgcgttgtatcatcgtttt
cctcgtgtagatgagggggatatgagccgcatgcgtgccacattggtgcgtggtaatacc
ctggctgaattggcaagggaatttgaactaggtgaatgccttcgtttggggccaggagaa
ttgaaaagcgggggttaccgtcgtgaatcaatactggctgataccgttgaagcgctgatt
ggtgctatcttccttgatagcgatattcagtctattgaaagaattattctgagctggtac
gaaacccgcctgaatgaaatcagccctggcgacaaacagaaagatccgaaaacccgttta
caggaatatttgcaagggcatcatctgcctctgccatcatatctggttgttatggttcgt
ggtgaagctcacgatcaagaatttactattcactgtcaagtgagcggtattgaacagccg
gttaaaggaacaggctccagccgtcgcaaagcggaacaggcagcggctgagcaagcatta
aaacaactggagcttgaatga
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