Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_18135
Help
Entry
A4R40_18135 CDS
T05478
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Pathway
plum00470
D-Amino acid metabolism
plum00550
Peptidoglycan biosynthesis
plum01100
Metabolic pathways
plum01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
A4R40_18135 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
A4R40_18135 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
A4R40_18135 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plum01011
]
A4R40_18135 (ddl)
Enzymes [BR:
plum01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
A4R40_18135 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
plum01011
]
Precursor biosynthesis
Amino acid ligase
A4R40_18135 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATPgrasp_ST
RimK
ATPgrasp_Ter
TTL
ATPgrasp_YheCD
Decapeptide
Motif
Other DBs
NCBI-ProteinID:
AWK43277
UniProt:
A0A6L9JHM9
LinkDB
All DBs
Position
complement(4299896..4300816)
Genome browser
AA seq
306 aa
AA seq
DB search
MAEKVAVLLGGTSAEREVSLLSGQAVLAGLREAGIDAHPVDTKDFPVTQLKEAGFEKVFI
ALHGRGGEDGTLQGVLEFLQLPYTGSGVMASALSMDKLRTKQVWQGIGLTVSPYVSINSQ
QVERLTDSQLQEYVADLGLPLIVKPSLEGSSVGMTKVNEISELRGALEAAFRYDVDLLVE
KWLHGPEYTVAILGDTALPSIRIQPAAVFYDYDAKYWSEETQYFCPSGLSDEKEQQLAEL
ALKAYQSVGCSGWGRVDVMMDTDGDFYLLEVNTSPGMTSHSLVPMAARQAGLSFSQLVVK
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaagtcgcggtactgttgggaggaacttccgctgagcgtgaagtttcgctg
ttatcgggacaagccgtgttggctggattgagagaagcgggtattgatgcacatccagtt
gatacaaaagattttcctgtgactcaacttaaagaggccggatttgagaaagtctttatc
gcgcttcatgggcgtggtggggaagacggtactttgcaaggggtattggaatttttgcag
ttaccctataccggtagtggcgtgatggcttctgcactgtcaatggataaattgcgtaca
aaacaggtatggcagggaattgggttgactgtttcgccgtatgtttcaattaattctcag
caagttgaacgattgactgattctcaactccaagaatatgtagcagatttaggtttgcca
ttaattgttaagccaagtctggaaggttccagtgttggtatgactaaggttaatgagatt
tcggagttgcgtggtgcattagaggctgcgtttcgttatgacgttgacttgctggtcgaa
aaatggttgcacggcccggaatacacagtagccatccttggtgatacggctttaccttct
attcgtattcaacccgctgctgttttttatgactatgatgcaaaatattggtctgaagaa
acacaatatttttgtccaagtggcttaagtgatgaaaaagagcagcaattggcagaactg
gcgcttaaagcttatcagtcagttggatgcagtggttgggggcgagttgatgtcatgatg
gatactgatggtgatttctatctgttggaagtgaatacctctccggggatgaccagccac
agcttggtgccgatggctgcgcgtcaggctggattaagtttttcacagttggtggtaaag
attttggagttggctgattga
DBGET
integrated database retrieval system
