Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_19460
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Entry
A4R40_19460 CDS
T05478
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plum03400
]
A4R40_19460
DNA repair and recombination proteins [BR:
plum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A4R40_19460
Archaeal homologous recombinant proteins
A4R40_19460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
nSTAND_NTPase5
AAA_21
ABC_tran
SMC_N
cobW
AAA_14
NTPase_1
AAA_22
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AWK43516
UniProt:
A0A6L9JMI0
LinkDB
All DBs
Position
4587230..4590916
Genome browser
AA seq
1228 aa
AA seq
DB search
MKILSLRLKNINSLQGEWKIDFTAEPFASSGLFAITGPTGAGKTTLLDAICLALYHETPR
LTISTSQNELMTRHTAESLAEVEFEVKGVAYRAFWSQRRARNQPNGNLQAPKVELALSSS
GKILADKIQDKKEKIIEITGLDYGRFTKSILLSQGDFAAFLNAQPNERADLLEELTGTEI
YGILSQQIYQQHKQAQSVLDILQAKASTIDLLTAEQHQQYLEQQQQLTHAESQLNQQIKT
VQHSAQWLTREEELEQLVTENNAILQQAEKALTHAEPQLQKLANSEPAETLRPLLDDKNR
TQYEHQRTSKQLEEMHQQLQQLQQTLTPIQQKVAHADSARAEYQQHRQQQEKLITEQVIP
LDHQIAVQIKELNLTQQQINEQKTVLENRCQQYDTANQRALSFTNQRKQLENYFEQQPYH
QYFGEKLAFWQHQFSWRQEHQQQIDHQTQKVGKLTAEITQLSNNLNKQGEDLKQQIENNQ
PLELAFEQAKQQFFTLQKQYSPEKLKKQLTQYQEQLPLQHKLEILSPQILQLQAAIASHH
IRLQQPEKLLKEFPVQIESIDKQLSDKQQHLSDLTQRIQLEQKIVSLEKERAQLKEGSPC
PLCGAEHHPAIQAYQNIELPKSEQRLKDLRQQFEALQATKISLVNKKEFQQQEYDHILQE
ITDAEPRLNILTQQWQETCAILQTEISLSDKPALELFVQQNQSAHRLCQTQLTEFELAEK
TYQKTEKTVTAHQEYVKEIERNIELSKHQHNILKKQLSELQPEIQQQQHKLTDVIEKMTS
ELQQYNLSLPMLNDTENWLQQRREEWQIYQNCHENWQQIQKEEAVIQNQIESLHKQKEEY
LSHLNRLNQTAQQQKQQLAETQQQRQQLFGEQSVTEITQALQQQSQKLEEMHKQALSHLQ
QAQSSINQLTGAIHETEKNDNQSEQQKQQAEQNFNAALAKSPFADQHAVESALLSQEQRK
ELRQLKEQLEQQQIQANALCQKAAETLQQHRKNRPELLNQYTKSQLTEQLENMTDELKRN
TLQQGELKNLLGNDAIRRQQQKSLLEEISHCRQNYDDWSYLNNLIGSADGAKFRRFAQGL
TLDHLVHLANQRLKKLHGRYDLQRKNSDGLELQVVDTWQADAIRDTKTLSGGESFLVSLA
LALALSDLVSNKTCIDSLFLDEGFGTLDPETLDIALDALDHLNASGKTIGVISHIEAMKE
RIPVQIKVKKINGLGISKLSPEFRYDQQ
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttgagtttacggctaaaaaacattaattcattacaaggtgaatggaaaatt
gatttcacagcagagccgtttgccagcagtggtttgttcgccataaccggcccgaccggt
gcgggtaaaaccaccttattggatgcgatctgccttgcgctttatcacgaaaccccacgc
ttgacgatttctacctcacaaaatgagctgatgacccgacacactgcggaatcattggct
gaagtagagtttgaagtgaaaggtgtcgcttaccgtgctttctggagccaacggcgagcg
cgtaatcaacccaatggcaacctgcaagcccctaaagtggaactcgcccttagcagcagt
ggtaaaattctggccgataaaatccaagataagaaagaaaaaatcattgaaattactgga
ttagattacggccgtttcaccaaatccatattgctatcccaaggagatttcgcggctttc
ctcaatgctcagccaaacgaacgggctgatttattggaagagttaaccggcactgaaatt
tacggaattttatcccaacaaatttaccaacaacataaacaagcacaatcagtgctggat
attctgcaagccaaagcatctaccattgatttgctaacggcagagcagcatcaacaatat
ctggaacaacagcaacaactcacccatgcagaatcacaactcaatcagcagataaaaaca
gtgcaacattcggcgcaatggctgacacgtgaagaagaacttgagcaactcgtcactgaa
aataacgctatcttacagcaggcagaaaaagcgcttactcatgcagagccgcaactgcaa
aaactggctaacagtgaacccgcagaaacactgcgcccattgctggatgataaaaaccga
acacaatatgaacatcagagaaccagcaaacagttggaagagatgcatcagcaacttcaa
caactgcaacagacgctcacaccgatacagcaaaaggtggctcatgcagattctgccaga
gcagagtatcaacagcaccggcaacaacaagaaaagctgataacagaacaggtgattcca
ttagatcatcaaattgcggtacagattaaagagctcaatcttactcagcaacaaatcaac
gaacagaaaacggtgcttgaaaaccgttgtcaacaatatgacacagcaaatcagcgcgcc
ttatcattcaccaatcaaagaaaacaactggaaaactatttcgaacaacaaccttatcat
caatatttcggtgaaaaactggctttttggcaacaccaattctcgtggcggcaagaacat
caacaacaaattgaccaccaaacacaaaaagtaggcaagctcactgccgaaatcacgcaa
cttagcaataacctgaacaaacaaggggaagacttaaaacaacaaattgaaaataaccaa
ccgctggaactggcatttgaacaggccaagcaacaattttttactctgcaaaaacaatat
tcgccagagaaattaaaaaaacaattaactcaatatcaggaacagctaccgctgcaacat
aaactggagatcctgtcgccacaaatcttacaattacaagccgctattgccagtcatcat
attcgcttacaacaaccggaaaaattattaaaagaatttcctgttcaaattgaatccatc
gataaacaactctcagacaaacagcaacatttatccgatcttactcaacgtattcagtta
gaacaaaagattgtcagtctggaaaaagagcgggcacagctcaaggaaggttctccttgc
ccactatgcggtgctgaacatcatcctgcaattcaggcttatcaaaatattgaactgcca
aaatcagaacaacggttaaaagatttacgccagcaatttgaagcgctgcaagccaccaaa
atatcattggttaataaaaaagagttccaacagcaagaatacgaccatattttacaagaa
attactgatgctgaaccacgattgaatatattaacgcaacaatggcaggaaacttgcgca
atattacagaccgaaatttctctttcagataaacccgctcttgaactatttgtgcaacaa
aaccaatcggctcatcggctttgccaaactcaattaaccgaatttgaactggcagaaaaa
acgtaccagaaaacagaaaaaacagtgaccgctcatcaagaatacgttaaagaaattgaa
cgaaatattgaactgagtaagcatcaacacaatatactgaaaaaacagttatctgaattg
caaccagagatacaacaacagcagcataaactaactgatgtcatcgaaaaaatgacgtca
gaattacagcaatataatttatccctgccaatgctgaatgatactgaaaactggctgcaa
caacgtagagaagagtggcagatataccaaaactgtcatgaaaactggcaacagatccaa
aaagaagaagcggtcattcaaaatcaaattgaatcattgcataaacagaaagaagaatat
ctctcccatctaaataggcttaatcaaacagctcaacaacagaaacagcaactcgcagag
acacaacaacagcgccaacaactatttggtgaacaatccgttacggaaatcactcaggca
ttacaacaacaatctcaaaagcttgaggaaatgcacaaacaagcattgtcacatctgcaa
caagcgcaatccagcatcaaccaactgaccggtgccattcatgagacagaaaaaaacgat
aaccagtctgagcaacaaaaacagcaggcagaacagaatttcaatgctgcattagcaaaa
agcccatttgccgatcagcacgccgttgaatcagcgctgttatcgcaagagcaacgtaaa
gaattgcgacaacttaaagaacagcttgaacaacagcagatacaagccaacgccctatgc
cagaaagcagcagaaaccctgcaacaacatcggaaaaatcgccctgagttacttaatcaa
tatacaaaatcacaactgaccgaacagttggaaaacatgactgatgagctaaaaagaaac
accttacaacaaggagagctgaaaaacctgcttggtaatgatgcaatacgccgtcaacag
caaaaatccttattggaagagatcagccattgccgacaaaattatgatgactggagttat
cttaataacctgattggttcggctgatggtgctaaattccgtcgctttgctcaaggatta
acactggatcatttggttcatctcgccaatcaacggctgaaaaaattgcacggacgctac
gatttgcaacgtaaaaacagtgatggtcttgaactacaagtggttgatacctggcaagcc
gatgctattcgtgataccaaaacgctttccggtggcgaaagttttctggtcagcctcgcc
ctggctttagcactatctgatttagtcagcaataaaacctgtattgattcactgttcctg
gatgaaggctttggcacacttgatccagaaacccttgatattgctcttgatgcactggat
catttaaatgcttccggtaaaaccataggtgttatcagccacattgaagctatgaaagaa
cggatacctgtacagattaaggttaaaaaaattaatgggcttgggataagtaaactctca
cctgagtttcgttatgatcaacaatag
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