Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_20515
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Entry
A4R40_20515 CDS
T05478
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Pathway
plum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4R40_20515 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plum03019
]
A4R40_20515 (groEL)
03110 Chaperones and folding catalysts [BR:
plum03110
]
A4R40_20515 (groEL)
03029 Mitochondrial biogenesis [BR:
plum03029
]
A4R40_20515 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plum04147
]
A4R40_20515 (groEL)
Enzymes [BR:
plum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
A4R40_20515 (groEL)
Messenger RNA biogenesis [BR:
plum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
A4R40_20515 (groEL)
Chaperones and folding catalysts [BR:
plum03110
]
Heat shock proteins
HSP60 / Chaperonin
A4R40_20515 (groEL)
Mitochondrial biogenesis [BR:
plum03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
A4R40_20515 (groEL)
Exosome [BR:
plum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
A4R40_20515 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
A4R40_20515 (groEL)
Exosomal proteins of breast cancer cells
A4R40_20515 (groEL)
Exosomal proteins of colorectal cancer cells
A4R40_20515 (groEL)
Exosomal proteins of bladder cancer cells
A4R40_20515 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
AWK43711
UniProt:
A0A6L9JV45
LinkDB
All DBs
Position
complement(4822822..4824468)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGSDARVKMLRGVNILADAVKVTLGPKGRNVVLDKSFGAPAITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVTEGLKAVAAGMNPMDLKRGI
DKAVVAAVAELKKLSVPCSDSISIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEEG
TGLEDELDVVEGMQFDRGYLSPYFINKPENGSVELENPYILLVDKKISNIRELLPVLEGV
AKASKPLLIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLHDIAVLTNGNV
ISEEIGLELEKATLEDLGQAKRIVINKDTTTIIDGVGEEDAIKGRVSQINQQIKESTSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKRARVDDALHATRAAVEEGVVAGGGVALV
RVAAAIVGLKGDNEDQNVGIRVAMRAMEAPLRQIVDNSGEEPSVIANSVKAGEGNYGYNA
TTEQYGDMIAMGILDPTKVTRSALQFAASIAGLMITTECMITDLPKDDKADLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaatttggtagcgatgctcgcgttaagatgctacgtggtgta
aatattcttgctgatgcagtaaaagtaaccttgggccctaaaggccgtaacgttgtgctg
gataaatctttcggtgctcctgcaatcactaaagacggcgtttccgttgctcgtgaaatt
gaactggaagacaagttcgaaaacatgggtgctcagatggtgaaagaagttgcctctaaa
gcgaatgatgctgcgggcgacggcacaacaacagcaactgtattggctcagtctattgtt
actgaaggtctgaaagccgtagccgctggtatgaatccaatggatctgaaacgcggtatt
gacaaagccgtggttgcagcagtggcagaactgaaaaaactgtccgtaccttgctcagat
tccatctctattgctcaggtaggtactatctccgcgaattccgacgaaactgtgggtaaa
ttgatcgcagaagcgatggataaagtcggtaaagaaggtgtaatcaccgttgaagaaggt
actggcctggaagacgagctggatgtcgttgaaggtatgcagtttgaccgtggttacctc
tctccttatttcatcaacaaaccagaaaacggttctgttgaattagaaaacccatatatt
cttctggtagataaaaaaatctccaacatccgtgaactgttgccagttctggaaggtgta
gctaaggcaagcaagcctttgctgattgttgcggaagatgttgaaggtgaagcactggca
actctggttgttaataccatgcgtggcatcgtcaaagttgctgcggtcaaagcgcctggc
ttcggtgatcgccgtaaagcaatgctgcatgacattgctgtcttgactaacggtaatgtt
atttctgaagagatcggcctagagttggaaaaagcaacgttggaagatctgggtcaggca
aaacgtatcgttatcaacaaagataccacaaccatcattgatggcgttggtgaagaagat
gcaattaaaggccgtgtttctcagatcaatcagcagatcaaagagtccacttctgattac
gaccgtgaaaaactgcaagagcgcgtagctaaactggctggtggtgttgctgttatcaaa
gttggtgctgcaacagaagttgaaatgaaagaaaaacgcgctcgcgttgacgatgctctg
catgcaactcgcgcagcagtagaagaaggcgtggtagctggtggtggtgttgcactggtt
cgcgttgcagcggctattgttggtctgaaaggcgataacgaagatcaaaacgtaggtatc
cgtgttgcaatgcgcgcgatggaagctcctctacgtcagatcgttgacaactcaggtgaa
gagccatctgttatcgcaaacagcgtgaaagcaggtgaaggcaactacggttataacgca
acgactgaacagtatggcgatatgatcgcaatgggtattttggatccaaccaaagtgacc
cgttctgcactgcaatttgcagcatctatcgctggtctgatgatcaccactgaatgtatg
atcactgacctgcctaaagatgataaagctgatttaggtgcagcaggcggtatgggtggc
atgggcggtatgggcggtatgatgtaa
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