Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_21835
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Entry
A4R40_21835 CDS
T05478
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Pathway
plum00071
Fatty acid degradation
plum00280
Valine, leucine and isoleucine degradation
plum00310
Lysine degradation
plum00362
Benzoate degradation
plum00380
Tryptophan metabolism
plum00410
beta-Alanine metabolism
plum00640
Propanoate metabolism
plum00650
Butanoate metabolism
plum00907
Pinene, camphor and geraniol degradation
plum00930
Caprolactam degradation
plum01100
Metabolic pathways
plum01110
Biosynthesis of secondary metabolites
plum01120
Microbial metabolism in diverse environments
plum01200
Carbon metabolism
plum01212
Fatty acid metabolism
Module
plum_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
A4R40_21835 (fadB)
00650 Butanoate metabolism
A4R40_21835 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
A4R40_21835 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
A4R40_21835 (fadB)
00310 Lysine degradation
A4R40_21835 (fadB)
00380 Tryptophan metabolism
A4R40_21835 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
A4R40_21835 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
A4R40_21835 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
A4R40_21835 (fadB)
00930 Caprolactam degradation
A4R40_21835 (fadB)
Enzymes [BR:
plum01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
A4R40_21835 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
A4R40_21835 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
A4R40_21835 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
A4R40_21835 (fadB)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AWK43951
UniProt:
A0A6L9JP76
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All DBs
Position
5149376..5151562
Genome browser
AA seq
728 aa
AA seq
DB search
MLYQSETIQVSWLKDGIAELVFNAPAAINKLDTKTVASLDKAIASLEQQTGLKGVLLRSE
KTAFIVGADITEFLSLFDSPVEKLQEWLNFSNSIFNRIEDLPVPTISAINGYALGGGCEC
VLSTDFRVASPDIRIGLPETKLGIMPGFGGSVRLPRLIGTDNALDIIAAGKDIGAEEALK
NGLIDAVVPKEKLVDSAVSMLEQAIAGNLDWKAARQPKLEPLKLNETERGMSFSVAKGMV
MKVAGPHYPAPITAVKSIEKAATFGRDEALKQETASFIPLAQTNVARALVGIFLNDQYVK
GLAKKHLKEVTIPEYAAVLGAGIMGGGIAYQSARKGIPVMMKDISQQSLELGMNEAAKLL
NKQFERGRLDAIKMARTLSSIQPTLNYAGIEQAQIVVEAVVENPKIKAAVLSETETLVNE
DCVLASNTSTIPISELAKSLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSEKTISTVVAY
ASKMGKTPIVVNDCPGFFVNRVLLPYLLGFGLLLRDGGDFRQIDKIMEKEFGWPMGPAYL
IDVIGLDTAHHSQSVMAQGFPDRMHRDYKDAIHVLYDNQRYGQKNGLGFYKYTQDKKGKP
KKEQDEQTDQLLATICQQKSNFSGEEIIARTMIPMINEVVRCLEEGVIASPAEADMALVY
GLGFPPFHGGVFRYLETMGTAAYVKMAENYAHLGALYQVPPGLKAKAERNESYYSTAATI
AVSTGKTA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgctctatcaaagtgaaacaattcaagtaagctggctgaaagatggcattgctgaactg
gttttcaatgccccagccgcgattaataaactagataccaaaaccgttgcatctctcgac
aaggctattgccagcctagagcaacaaactggattgaaaggcgttttattacgttctgaa
aaaaccgcatttattgttggtgcagatattactgaattcctctctttattcgattcacct
gtagaaaaactgcaagaatggcttaacttttcaaatagcatttttaaccggatagaagat
ttacctgtaccaaccatttcagcaataaacggttatgctcttggtggtggttgtgaatgc
gttctatctacagatttccgtgtggcctccccggatatacgcattgggttaccagaaacc
aaacttggtattatgcctggtttcggtggctcagttcgccttccacgcctgatcgggact
gataatgcattggatatcattgccgcaggtaaagacattggtgcagaagaagcattgaaa
aacggtttgattgatgctgttgttcccaaagaaaaactggttgattccgcagtatcaatg
ctggaacaagcaattgcagggaacctcgactggaaagccgcacgccagccaaaattagag
cctttgaaactcaatgaaactgaacgaggcatgagttttagtgtggcaaaaggtatggtg
atgaaagtcgccggccctcattatccagctcctatcaccgcagttaaatctatagaaaaa
gccgctacatttggtcgcgatgaagcattgaaacaagaaaccgccagcttcattccttta
gcacagacaaatgttgcccgtgccttagtgggtatttttcttaatgaccagtacgtaaaa
ggactggcaaaaaaacatctgaaagaagtcacaatacctgaatatgccgcagttctaggt
gctggaattatgggtggtggtatagcctatcaatccgcccgcaaagggattcctgtcatg
atgaaagacatcagccagcaatcccttgaattaggtatgaatgaagccgcgaaacttcta
aacaagcaatttgaacgtggccgtctagatgctataaaaatggcgagaaccctctcttct
attcaacctaccttaaattatgccggtatcgaacaggcccaaatcgtggttgaagctgta
gtagagaatcctaagatcaaagcggctgtactatcagaaactgaaactctggttaatgaa
gattgtgtcctagcttccaacacatcaacaattccaatttcagaattagctaagtcccta
aaacgcccggaaaacttctgtggtatgcatttcttcaacccggtacaccgcatgccgttg
gttgaagtcattcgcggtgaaaaaacgtctgaaaagacaatttcaaccgtagtcgcctat
gccagcaaaatgggtaaaactccgatcgtcgttaacgactgtccagggttctttgtaaac
cgagtactgcttccctatctccttggcttcggtctgctattgcgtgatggtggtgatttc
cgccaaatagacaaaatcatggagaaagaatttggttggccaatgggccctgcttacctt
atcgatgttattggtcttgatactgcacatcattctcaatccgtcatggcccaagggttc
ccagatcgtatgcatcgtgattataaagatgccattcatgttttatatgacaatcaacgt
tatgggcagaaaaacggccttggcttctataaatatacgcaagataagaaaggtaaacct
aagaaagagcaagacgagcaaacagaccaactgctggcaactatctgccaacagaagagt
aatttctccggtgaagagatcattgctcgtactatgatcccgatgatcaacgaagttgtc
cgttgtctggaagaaggtgtcattgccagcccagcagaagcagatatggctctggtttat
ggccttggcttccctccattccacggtggtgttttccgttatctggaaacaatgggaact
gcggcttacgtaaaaatggctgaaaattatgctcacctaggtgctctttatcaggtaccg
cctggtctgaaagccaaagctgaacgtaatgaaagttactactctacagcagcaacgatt
gctgtcagcaccggaaaaacagcgtga
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