Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_22975
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Entry
A4R40_22975 CDS
T05478
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Pathway
plum03420
Nucleotide excision repair
plum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A4R40_22975 (uvrD)
03430 Mismatch repair
A4R40_22975 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plum03400
]
A4R40_22975 (uvrD)
Enzymes [BR:
plum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4R40_22975 (uvrD)
DNA repair and recombination proteins [BR:
plum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4R40_22975 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
A4R40_22975 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
AWK44636
UniProt:
A0A6L9JIE3
LinkDB
All DBs
Position
complement(5404159..5406330)
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AA seq
723 aa
AA seq
DB search
MVTMDVSYLLESLNDKQREAVAAPRTNMLVLAGAGSGKTRVLVHRIAWLLSVEKASPFSV
MAVTFTNKAAAEMRHRIENLIGTSQGGMWIGTFHGLAHRLLRAHHLDANLPQDFQILDSE
DQNRLLKRIIKAMNLDDKQWPARQGMWYINGKKDEGLRPQHIESYGNPVEATWQKIYQAY
QEACDRAGLVDFAELLLRAHELWLNKPQILQHYRGRFTNILVDEFQDTNSIQYAWIHLLA
GETGKVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILKVANTLI
ANNSDRLGKNLWTDGVEGEPISLYCAFNELDEARYVVSRIKNWLENGGALKNCAILYRSN
AQSRVLEEALLQASMPYRIYGGQRFFERQEIKDALAYLRLIANRHDDAAFERVVNTPTRG
IGDRTLDIVRQAARERQQTLWDCCQILLQEKVLAGRAAASLQRFIELIDALSTETEDMPL
HVQTDRIIRDSGLRAMYQQEKGEKAQARIENLEELVTATRQFSYQDEDENFTPLQAFLSH
AALESGEGQADAYQDSVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSIEEGGRLEEERR
LAYVGLTRAMEKLTITYAESRRLYGKEVYHRPSRFIGELPSECIEEVRLRATVSRPVSHS
RLGTPISANDSGYALGQRVRHPKFGEGTIVNMEGSGEHSRLQIAFQGEGIKWLVAAYARL
EMV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggtaactatggacgtctcctatctgctcgaaagtctgaatgacaaacaacgggaagct
gtagctgctccgcggactaatatgttggtattagctggcgcggggagtggtaaaacccgg
gttctagtacaccgaattgcttggttgctatcggtggagaaggcttcgccattttctgtt
atggctgtgaccttcaccaataaagcggctgcggagatgcgtcatcggattgaaaacttg
atcggtaccagtcaaggtggaatgtggattggtacgtttcacggtttggctcatcgttta
ttacgagcccatcatctggatgctaatttgccacaggattttcagattcttgacagtgaa
gatcaaaatcgcctgcttaaacgcattatcaaagcgatgaatctggatgataaacaatgg
ccagctcgtcaaggcatgtggtacatcaatggtaaaaaagatgaaggattgcggccacag
catattgaaagttatggcaatcctgttgaggcgacatggcagaaaatttatcaggcttac
caggaggcttgtgatcgggccgggctagtggattttgctgagcttttactgcgagctcat
gagttgtggctgaataaacctcagatcctgcaacattaccgtggccgctttactaatatt
ctagtggatgagtttcaggacactaacagtattcaatatgcttggatccatctgttggca
ggagaaacaggcaaagtgatgattgttggggatgatgatcaatctatttatggttggcgt
ggggctcaagttgagaatattcagcgtttcctgaaagattttcccggtgctgaaactatc
cgtttggagcagaattaccgttccaccagtaatattctgaaagttgccaatacactgatt
gccaataacagtgatcgtctgggtaaaaatttgtggactgatggggtagagggtgagccc
atctccctttattgtgcatttaatgaactggatgaagcccgttatgtggtcagccggata
aaaaactggcttgaaaatggtggtgccctgaaaaactgtgccatactttaccgcagcaac
gcgcagtcccgtgtactggaagaggcgctgttacaggcatcaatgccataccgtatttat
ggtggtcaacgattctttgaacgtcaggaaattaaagatgcactggcttacctgcgtttg
attgccaatcgtcatgatgacgcggcgtttgaacgtgtggtgaatacgcctacccgtggt
attggtgacagaacgttagatattgtgcgccaggcggcgcgtgaacggcagcaaacgttg
tgggattgttgtcagatattgctgcaagagaaagtgttggctgggcgtgccgctgcttcc
ttacagcgttttattgaactaattgacgcattatcgacagaaactgaagatatgccattg
catgttcagactgacaggattatccgtgattctggcctgcgagcaatgtatcagcaggaa
aaaggtgaaaaagcgcaggcgcgtattgaaaaccttgaagaacttgtcacggcgactcgc
cagtttagctatcaggatgaggatgaaaatttcacgccattgcaggcgtttctttcccat
gctgcgctggaatcgggagaagggcaggccgatgcctatcaggattcggtacaactgatg
acattacattcggcgaagggactggaattcccacaggtatttattgttggtatggaagaa
ggcatgttcccaagtcagatgtcgattgaagaaggtggacgtttggaagaggagcgtcgc
ttggcttatgtgggtctgacacgtgcaatggaaaagctgaccatcacttatgccgaaagt
cgtcgtttatatggcaaagaggtttatcatcggccatctcgttttattggggaactgccg
tcagaatgtattgaagaagttcggttacgtgcgacagtatctcgtccggttagtcatagt
cggttaggtacaccaattagcgccaatgatagcggttatgctcttgggcaacgtgttcgt
catcctaaatttggtgaaggaaccattgtcaatatggagggaagtggtgaacatagccga
ttgcaaatcgcgtttcaaggggaaggaattaagtggctggttgctgcttatgccaggctt
gaaatggtctga
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