Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_24330
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Entry
A4R40_24330 CDS
T05478
Name
(GenBank) selenocysteinyl-tRNA-specific translation elongation factor SelB
KO
K03833
selenocysteine-specific elongation factor
Organism
plum
Photorhabdus laumondii subsp. laumondii DSPV002N
Brite
KEGG Orthology (KO) [BR:
plum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
plum03012
]
A4R40_24330
Translation factors [BR:
plum03012
]
Eukaryotic type
Elongation factors
A4R40_24330
Prokaryotic type
A4R40_24330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_SelB
WHD_2nd_SelB_bact
GTP_EFTU
WHD_1st_3rd_SelB
WHD_3rd_SelB
WHD_2nd_SelB
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
Motif
Other DBs
NCBI-ProteinID:
AWK44383
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Position
5674293..5676152
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AA seq
619 aa
AA seq
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MIFATAGHVDHGKTTLIQAITGVNTAHLPEEKKRGMTIDLGYAYWPQPDGSSVGFIDVPG
HEKFLANMLAGIGGIDHVLLVVACDDGVMAQTREHLAILRLIGRPAMTVALTKADRVETQ
RIVEVRQQIEHELATQGWSESPLFVTAAADKESIVPLRQHLLQLHQQNKQHKKLHQRFRL
AIDRAFSVKGAGLVVTGTALAGRVRVGDTLWLTGRDQQIRVRGLHAQNQQADTAQAGQRI
ALNIAGDVSKEQVSRGDWLLSRQPFEHVEKVLVEVETDEPLRNWQSLHIHHAASHITGRI
SLLNPLSDKPLLAELVLDSPLWLVEDDRLILRDISARKTLAGTRVINLNSPRRGKRQPAF
LHWLTQLARTSDHAANLALHLPRGALSLDHFSWARQLTEATLHPLIVDQDMIIADGMVLS
QNNAKLAKQKLLHVLAEYHQQHVDQLGLGRARLKRMALPTLDEALVYTLIDALLSDGQLK
QLRGWLYLPEHGLSFSDEQAKLWQRIAPYFTDDPWWVRDLTADLKEEEATVRSLLKKAAQ
LGHIIAIVPDRYYCSQRIQQFADLIRQFNQDHGAITAADFRDQLGIGRKLAIQILEFFDR
SGFTRRQAESHILRDNGLF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgatttttgccaccgcgggccatgttgatcatggtaaaaccacacttattcaagcgatt
accggcgttaatacagcccatttgccggaagagaaaaagcgcgggatgaccatcgattta
ggttatgcctattggccgcaaccggatggctcttcggttggttttatcgatgtgcccgga
catgagaaattcctcgctaatatgttggcagggatcggaggtattgatcatgttttatta
gtggttgcctgtgacgatggggtaatggctcaaacgagagaacatttagctattctgcgt
ttgattggccgcccggccatgacagttgcgctcactaaagcagatcgggtagaaacacaa
cgaatagttgaagtccgccaacaaattgaacatgaactggcaacgcaaggttggagtgaa
tcccctctgtttgtaacggctgcggcggataaagaaagtattgtccctttgagacagcat
ctgttgcagttgcatcagcaaaataagcagcataaaaaattacatcaacgttttcgtctg
gcgatagatcgcgctttcagtgtaaaaggcgcaggcttggtcgtaacgggaacggcactg
gctggccgggtcagggtgggagataccctctggctaaccggccgggatcagcaaattaga
gtacgtggcttgcatgctcagaatcaacaggccgatacggctcaggccgggcaacgtatt
gcactgaatattgctggtgatgtgagtaaagaacaggtttcccgtggtgattggctactt
tcccgccagccctttgaacacgtagagaaagtattggtggaagtagaaactgatgaaccc
ttgcgaaactggcaatcacttcatattcatcatgctgccagccatataacggggcggatt
tcattactaaatccgctttctgataagcctctgctggctgaattggtgcttgatagccca
ttgtggttggttgaggatgatcgactgatattgcgagatattagtgccagaaaaacattg
gctggtacgcgggtaataaacctaaattccccccgccgtggtaagcgccaaccagcattt
ttgcattggctcactcagcttgccagaacatcagatcatgcagctaatttagcgctccat
ttgccacgaggtgcactctctctcgaccatttttcttgggcgcgtcagttaacggaagca
actctccacccgctaatcgttgatcaagatatgattattgccgatggtatggtgttatca
cagaacaatgccaagttagcaaagcagaagttactacacgttttggctgaatatcaccag
caacatgttgatcaactgggtttaggcagggcacgtctgaaacggatggcgctgccaacg
ctggatgaagcgctagtttacactttgatagatgccttgctcagtgatggacagctaaag
caattacgaggttggttatatcttcctgaacacggtttgtcttttagtgatgaacaggca
aaattgtggcaacgaatagcgccctattttacagatgatccttggtgggtacgcgacctg
actgctgatttaaaagaagaagaagcaacagttcgcagtttgttgaaaaaagctgctcaa
ttggggcatattatcgcgattgttcctgatcgttattattgcagccaacgaattcagcag
ttcgccgatctgattcgtcaatttaatcaagatcatggtgcaattaccgctgccgatttt
cgtgatcaactcggtatcggtcgtaaactggctattcagatattggaattttttgatcgc
agtggttttactcgtcgtcaggctgagtcacatattcttagagataatgggctgttctga
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