Paenibacillus lutimineralis: EI981_00030
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Entry
EI981_00030 CDS
T06479
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
plut
Paenibacillus lutimineralis
Brite
KEGG Orthology (KO) [BR:
plut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plut03032
]
EI981_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
plut03400
]
EI981_00030 (gyrB)
Enzymes [BR:
plut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EI981_00030 (gyrB)
DNA replication proteins [BR:
plut03032
]
Prokaryotic type
DNA Topoisomerases
EI981_00030 (gyrB)
DNA repair and recombination proteins [BR:
plut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EI981_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AZS13044
UniProt:
A0A3S9URZ5
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All DBs
Position
4723..6639
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AA seq
638 aa
AA seq
DB search
MSMNEQSYDESQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVWEVVDNSIDEALAGYANK
IDVIVHEDNSVTVIDNGRGIPVGEHPKLKKSTLEVVMTVLHAGGKFGGGGYKVSGGLHGV
GVSVVNALSEKMVVEVTRDGHVYQQEYRRGAPQYDIRVVGNSDEGKTGTKTTFHPDPEIF
TETTVFDYNTLLTRIRELAFLNKGINISLTDNRTGVSDTFHYEGGINEYVKYLNHTKEVL
HEEPIYVEGKRDMIQVEVALQYNDSYTENIFSFANNINTHEGGTHESGFKSALTRIINDY
ARKNSMIKENDSNLSGDDVREGLTAIISVKIPEPQFEGQTKTKLGNSEVRGIVESLFAEK
LQEFMEENPAVSRRILEKALQASRAREAARKARELTRRKSALEVSALPGKLADCSSKDAS
LSELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRILGNAEIRAIITALGT
GIGEEFDISKARYHKVIIMTDADVDGAHIRTLLLTFFFRYMRKIIEAGYVYIAQPPLFKV
ERNKVVRYAGSEAERDAIIAEFGENAKYNVQRYKGLGEMNAEQLWETTMDPESRTMQQVS
ISDAMEADKIFDVLMGDSVEPRRDFIHEHAKYVKNLDI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaacgaacaatcgtatgatgagagtcagatacaggtattggaaggtctggag
gctgtccgtaaacgtccggggatgtatattggttcgaccagtgcccggggcttgcatcat
ttggtctgggaagtcgttgataacagtattgacgaggcattggctggctacgccaataag
attgacgtaatagttcatgaagataacagcgtgacggttatcgataacgggcgtggcatt
ccagttggtgaacacccgaaattgaagaaatcgacccttgaggtcgttatgaccgttctc
catgccggaggtaagttcggcggcggtgggtataaagtatccggtggtctgcacggggta
ggtgtatctgttgtaaatgccctgtctgagaaaatggtcgttgaagttactcgtgacggt
catgtctatcaacaagaatatcgtcgtggtgctccacaatacgacatccgtgtggtcggc
aattcggatgagggcaagaccgggacgaagacgaccttccatcccgatccggaaatcttc
acggagacgactgtttttgactacaacactctattgacgcgtattcgtgaacttgccttt
ctgaataaaggcatcaatatttcattgacggataatcgtaccggagtctcggacactttt
cattatgaaggcggaattaacgaatacgttaaatatttgaatcataccaaagaagtattg
catgaagagccgatttacgttgaaggcaagcgcgatatgattcaggttgaagtggctttg
caatataacgacagctatacggagaatattttctccttcgccaataacattaacacgcat
gaaggcggtacacatgagtccggatttaagagtgcgttgacaagaattattaatgattat
gcccgtaagaatagcatgatcaaggaaaatgactccaacctgagcggggatgatgtccgt
gaggggttaacggcgattatctccgtgaaaattcctgagccacaatttgaagggcagacg
aagacgaagctcggcaatagtgaagtacgtggaattgtggagtccttattcgcagagaag
ttgcaggaattcatggaggagaatccagcggtatcgcgccggattctggagaaggctctg
caagcttcgcgggcgcgagaagcagctcgtaaggcacgggaattgacgcgtcgtaagagt
gcgctcgaggttagcgccttgccaggtaagctcgccgactgttcctctaaggatgcatcg
cttagcgaactgtatatcgtcgaaggtgactccgcaggcggatcggctaagcaaggacgt
gatcgtcatttccaagcgattctgccgctgcgcgggaagattctgaacgtggagaaggcg
cgtcttgatcgtattctcggcaatgcagagattcgtgcaatcattactgcactgggtacc
ggaatcggcgaggagttcgatatttccaaagcccgttaccacaaagttattattatgacc
gatgccgacgtcgacggagcgcatattcgtacattgctgttgaccttcttcttccgttac
atgcggaaaattatcgaagcaggatatgtatatatcgctcagccgcctttgttcaaggta
gagcgcaacaaggttgtccgctatgccggttctgaagcagagcgcgatgcgattattgct
gagttcggcgagaatgccaaatacaatgtgcagcgctataaaggtcttggcgagatgaac
gctgaacagctgtgggagacaaccatggatcctgagagccgtacgatgcagcaggtatcg
atctccgatgcgatggaagctgacaaaatattcgatgtgcttatgggcgatagtgttgag
ccgcggcgcgacttcatccatgaacatgctaaatacgtgaagaacttggatatttaa
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