Entry |
|
Symbol |
gyrA
|
Name |
(GenBank) DNA gyrase subunit A
|
KO |
|
Organism |
plut Paenibacillus lutimineralis
|
Brite |
KEGG Orthology (KO) [BR:plut00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:plut03032]
EI981_00040 (gyrA)
03400 DNA repair and recombination proteins [BR:plut03400]
EI981_00040 (gyrA)
Enzymes [BR:plut01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EI981_00040 (gyrA)
DNA replication proteins [BR:plut03032]
Prokaryotic type
DNA Topoisomerases
EI981_00040 (gyrA)
DNA repair and recombination proteins [BR:plut03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EI981_00040 (gyrA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
7819..10356
|
AA seq |
845 aa
MAEEKFSQIVDRDINVEMRESFMDYAMSIIVSRALPDVRDGLKPVHRRILYAMSELGMYP
DKPFKKSARIVGEVIGKYHPHGDSAVYETMVRMAQDFSMRYMLVEGHGNFGSIDGDFAAA
MRYTEARLSKIAMEMLRDINKETIDFMPNYDGEEHEPVVLPARYPNLLVNGVSGIAVGMA
TNIPPHNLGEVIDGVQAMIENPDIDSLELMEYIKGPDFPTAGFIVGRSGIRQAYTTGRGS
ITMRAKTTIEENNNKARIIVDELPYQVNKARLVEKIAELVREKRIDGITDLRDESDRNGM
RVVIELRRDVNPNVVLNNLYKHTSLQSTFGINMLAIVNNEPKILTLREVLHHYLKHQVEV
IRRRTEFELKKAEARAHILEGLRIALDHLDEVIALIRSSQTAEIARNGLIERFGLSEEQA
QAILDMRLQRLTGLEREKIEAEYQELLQKIAEYREILASEALVLQIISDELQEIRERYSD
DRRTAIIVGEESILDEDLIPQEEVVITITHTGYIKRLPVTTYRSQKRGGRGVVGMDTKDN
DFVEHLFVTNTHHYLMFFTDRGKAYRLKAYEIPELGRTARGTPIINLIQIEQGETVNAVI
PVENFDEDKYLFFATRQGIVKKTPLEDYVNIRKGGLIAVNLREDDTLIDVRLTDGEQELI
MGTAKGMSIRFPESDVRSMGRAATGVKGITLDEDDQLIGMDVIVPDQDILIVTTKGYGKR
TPVSDYRIQSRGGKGIKTINIKDKNGPVVGLKVVKDDEDLMIITSSGTLIRMSMEGISTM
GRYAQGVKLINIRDEDSVATVCRSDKSDDSEDTDELGKMNGDSTESISEDINTENMGEAP
ETDEE |
NT seq |
2538 nt +upstreamnt +downstreamnt
atggcggaggaaaaattttcgcaaattgtagatagggacattaatgtggaaatgcgcgaa
tcctttatggattatgcgatgagcatcattgtcagccgtgctttgcccgatgttagggat
ggtttgaagcctgtccatcggcgcattttgtatgcgatgtccgagctcggtatgtatcca
gacaagccgtttaagaaatcagcaagaatcgtcggcgaagttatcggtaagtaccatcct
catggtgattcagcagtatatgagaccatggtacgtatggcgcaggatttctcgatgcgt
tatatgctcgttgaggggcatggtaactttggctccatcgacggagactttgcagcagcg
atgcgttatacagaagcacgtctgtccaagatagctatggaaatgctgcgcgatattaac
aaagagaccatcgacttcatgccgaactatgatggtgaggagcatgaacctgtcgttctg
cctgcgcgttacccgaatctgctcgttaatggtgtgtcggggatcgctgtcgggatggca
actaacatcccaccgcataatttgggcgaagttatcgatggggttcaggccatgatcgag
aaccctgatatcgactctctagaattgatggaatatatcaaagggcccgatttcccaaca
gcaggcttcatcgttggtcgttccggcattcgtcaggcctatacgacgggccgcggctca
atcacaatgcgtgccaagactaccattgaagagaacaacaataaggcgcgtatcatcgtt
gatgaactgccttatcaggtcaataaggcccggcttgttgagaagattgctgaactggta
cgtgagaagagaatcgatggcattaccgatttgcgcgatgaatcagaccgtaatgggatg
cgcgtcgttatcgaattgcgtagggatgtaaatccgaatgtcgtattgaacaacttatat
aagcatacttccttgcaaagcacgtttggtattaatatgctcgctatcgttaacaacgag
cctaagattctgacgctgcgggaagttctacatcattatttaaaacaccaggttgaagtt
attcgccggcggacagaatttgaactcaagaaggcggaagcccgtgctcatattttggaa
ggcctgcggattgccttggatcatctggatgaagttatcgccctgatccgcagctcgcag
actgccgagattgcccgtaacggcttgatcgagcgcttcggtctgagcgaggagcaggca
caggctattctggatatgcgtctacaacgcctgactggcttggaacgtgagaagatcgag
gcagaatatcaagagcttctgcagaagattgccgaataccgtgagattctagctagtgaa
gcgcttgtactgcaaattattagcgatgaattgcaagagattcgcgaacgttattccgat
gatcgccgcaccgcgattatagttggtgaagagagcatcctagacgaggacttgattccg
caagaggaggtcgttattacgatcactcatacgggttacatcaagcgtcttccagttacg
acttatcgcagccagaagcgggggggacgcggtgtcgtcgggatggatacgaaggataat
gacttcgttgagcatctcttcgtgacgaatacgcatcattatttgatgttcttcacggac
cgcggtaaggcctaccgactgaaagcctatgagattccagagcttggtcggaccgcacgt
gggacgcctatcattaatctgattcagattgaacaaggcgagacggtcaatgccgtaatt
ccggtagagaacttcgatgaggataaatatttattcttcgcgactcgtcagggtatcgtg
aagaaaactccgcttgaagattacgtgaatatacgtaagggtggtctgatcgccgttaat
cttcgcgaagatgataccttgattgacgtaagacttaccgatggcgagcaagaactcatt
atgggtacagccaaaggaatgtcgatccgcttccctgagagtgatgtgcgttcgatggga
cgtgcagcaactggtgtgaaggggattacactcgatgaggatgatcaattgatcggtatg
gatgttatcgttccggatcaggatattctgatcgttacgacgaagggatacggcaaacgt
actccagtgtctgactatcgtatccagagtcgtggtggtaaagggattaagacgatcaat
attaaggacaagaatggtcctgtagtgggtctgaaggtcgttaaggatgacgaagacttg
atgatcattactagtagcggaaccttgatcagaatgagcatggagggcatttccaccatg
ggtcgttatgcacaaggagtgaagctgattaatattcgtgatgaggattctgtagctacg
gtctgccgttccgataagagcgatgacagtgaggatacggatgaattgggcaagatgaat
ggcgatagcaccgagtctatttcagaagatatcaatactgagaatatgggcgaagcgcca
gagacagacgaagaataa |