Paenibacillus lutimineralis: EI981_07805
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Entry
EI981_07805 CDS
T06479
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
plut
Paenibacillus lutimineralis
Pathway
plut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EI981_07805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plut03019
]
EI981_07805
Messenger RNA biogenesis [BR:
plut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EI981_07805
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Polo_box_4
Barttin
Motif
Other DBs
NCBI-ProteinID:
AZS14368
UniProt:
A0A3Q9I7I5
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Position
1907091..1908797
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AA seq
568 aa
AA seq
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MNEVVPKPVKNYRRSKPSQPPVRIYSLGGLGEIGKNMYGIEFRNEIIIIDAGLKFPDSKL
SGIDYIIPDVSYLVKNQHKIKGLFLTHGHEDHIGALPFVLRQLKVPVYGGPLTIGLVRAK
LEEYRMLEQTELHVFQENDRFAYKHLTVHFFRTTHSIPDAFGIVVDTPYGAVVHTGDFKF
DFTPEDHPANIAKMASVGSEGVLALLADSTNSEKDGFTPSEHRVGNAILETFHNCHGRIL
FAMFASNVNRLQQVVDAAIMSNRKIAVIGRSMERVFAIGQDLGYIRVPDGMLIDIKQIDK
YEDNRILIICTGSQGEPNAALSRIASGAHRSVSIYPGDSVVFSSSPIPGNGPNINRCIDL
LMRAGANVIYGSVFGIHASGHGCREDLKLMLRFIQPKYFIPIHGEYRMLLAHKKLAMQTG
MNEEQVFLMNLGDTLSVYRNRAKRGRSIPAGEVIVSNGEIRTFEEELVEEREVLAQEGIV
IVVMTVDVATRQILAGPDIVTRGFVYMQDARPLLRRAEMALRRSLKKLGEQGPYDSNAWV
KTTNRVLRRFFIREVGRTPHIMPSILEV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaagttgtcccaaaaccggtgaaaaattaccggcgttccaagccttcccaaccg
cctgtacgcatatactcgcttggcgggctcggggaaatcggaaagaacatgtacggtatt
gaatttagaaatgagatcattattatcgacgctgggctgaaatttcccgattccaagctg
tcgggaatcgattatattattccagatgtcagttatttagttaagaatcagcataaaatc
aaaggtttatttctgacgcacggacatgaagatcatattggggccctgccttttgtactc
cgccagttgaaggttcctgtgtacggtggaccgttaacgatcggactggtgcgggcgaag
cttgaagaatatcgaatgctcgaacagacggaattgcatgtatttcaggagaatgacaga
tttgcctacaagcatctcaccgttcatttcttccgcactacacacagtatcccggatgca
ttcgggattgtcgttgatactccatacggagcagtcgtccatacgggcgacttcaaattc
gatttcacgccggaggatcatccggctaatatcgctaagatggctagtgttggcagtgag
ggtgtactcgccctgcttgcggatagcacgaacagtgagaaggatggcttcaccccttca
gagcatcgtgtaggcaatgctattcttgagaccttccataattgccatggccgaattctg
ttcgccatgtttgcttctaatgtgaaccgtctacagcaggttgtcgatgccgccatcatg
agcaaccgcaaaattgccgtcattggacgaagcatggagcgcgtatttgcgatcggtcag
gatctgggatatatccgtgttcctgatggaatgttaatcgatattaagcaaattgataaa
tatgaagacaatcggatcttgattatttgtacgggcagccaaggggaaccgaacgcggca
ctgagtcggatcgcttctggtgcgcatcgttcagtttccatttatccgggagattcggtt
gtgttctcatcatcgccaattccgggcaatggcccgaatatcaatcgctgtatcgatttg
ctgatgcgggctggtgctaatgtcatttatggttccgtattcggtattcatgcttcagga
cacggatgccgagaagatttgaagctgatgctgagattcattcagccgaaatatttcatt
ccgattcatggggaataccggatgctgttagcacataaaaaattagcaatgcaaacgggg
atgaacgaggagcaagtgttcctgatgaatctcggagatacgttatcggtataccgcaat
cgcgccaagcgcggtcgcagcattcctgcaggagaggtcatcgtcagcaatggcgagatc
cgaacttttgaagaagaattagtagaagagagagaagtccttgctcaggaggggattgtc
atcgtcgtcatgacggtggatgtggcaacacgccagattctcgctgggccggatattgta
acgagaggctttgtatacatgcaggacgccagacctttactcagacgggcggagatggca
ctgcggcgaagcttgaagaagctaggcgaacaagggccatatgacagcaatgcctgggtg
aagacaaccaatcgggtgttgcgcagattctttatcagagaggttggacggaccccgcat
attatgccttcgattctggaggtttaa
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