Paenibacillus lutimineralis: EI981_19330
Help
Entry
EI981_19330 CDS
T06479
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
plut
Paenibacillus lutimineralis
Pathway
plut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EI981_19330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plut03019
]
EI981_19330
03009 Ribosome biogenesis [BR:
plut03009
]
EI981_19330
Enzymes [BR:
plut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EI981_19330
Messenger RNA biogenesis [BR:
plut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EI981_19330
Ribosome biogenesis [BR:
plut03009
]
Prokaryotic type
rRNA helicases
EI981_19330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Helicase_RecD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AZS16388
UniProt:
A0A3Q9IEJ3
LinkDB
All DBs
Position
complement(4373341..4374918)
Genome browser
AA seq
525 aa
AA seq
DB search
MNTFSEFGLEPKVLQAITELGFEEATPIQAKSIPIAMTGRDMIGQAQTGTGKTAAFGLPL
INKISKDEEHIVALIMTPTRELAIQVAEEIGKLARFKGTRSLAIYGGQDIVRQIRALKKK
PQIIIGTPGRLLDHINRKTIKLDDVQTVVLDEADEMLDMGFMEDIQSILKLVPEERQTML
FSATMPSNIQKLAQQFLKNPEHVSVIPKQVSAPLIDQAYIEVNERQKFDALSRLLDMESP
ELAIVFGRTKRRVDELSEALQKRGYSADGLHGDLSQNQRDNVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVVNFDLPQDPESYVHRIGRTGRAGKEGTAWSFVTPREIDHLHFIERITR
HKITRKPLPTLAEAIEGKQRIAAERILEIVEEGELREYKGIAIQLLEQYDSVNLLAAAFK
LITGEKSDKASIELTPEEPIRVKRRNPDIRSSGRKPSGYGNRGGYRRDNREGGNREGGNR
GGYKGGYNKEGGRDSYRGGSSDRKPRSSYNNGERRPKNGGSFSDK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
ttgaacacattttcagaatttggcctagagcctaaagtattacaagctataacggagctt
ggatttgaggaagcgaccccgattcaagctaaatcgatcccgattgcgatgaccggtaga
gacatgatcggacaagcacaaacagggacaggaaagactgcagcttttggtttgccgctt
atcaataaaatctcgaaagatgaagagcatatcgtagctctcattatgacacctacccgt
gaattagctatccaggttgcagaagaaatcggcaagcttgcccgcttcaagggaacccgt
tcattggccatttatggcggacaggatattgttcgtcagatccgtgcgctgaagaagaag
ccacagatcatcatcggtaccccaggacgcttgctggaccatatcaatcgtaagacgatt
aagctcgacgatgtacagactgttgtactggatgaagccgatgaaatgctcgatatgggc
ttcatggaagatatccaatcgatcctgaagcttgtccccgaagaacgtcagacaatgtta
ttttccgcgactatgccttcaaatatccaaaaactggcgcagcaatttttgaaaaatcct
gagcatgtatctgtaattcctaaacaggtaagcgccccgcttattgatcaagcctatatt
gaggttaatgaacgtcagaaatttgatgccctttcccgtttactcgatatggagtcacct
gagcttgcgatcgtatttggacgtactaagcgtcgtgtcgacgagttgtctgaagctttg
caaaaacggggttactctgcagacggcctgcatggcgacttgtcgcagaatcaacgtgac
aatgtcatgcgtaaattccgtgacggaagcatcgacgtgctcgttgctaccgacgtggct
gctcgcggcctggacgtatccggcgtaacgcacgttgtcaactttgacttgccgcaggat
ccggagagctatgtacaccgtattggccggaccggccgtgcgggtaaagaagggacagct
tggtcctttgtaactccacgggagattgaccatttgcacttcatcgagcggattactcgt
cataagattacccgcaagccattgcctacacttgctgaagcaattgaaggtaagcaacgg
attgcagctgagcgaatccttgagatcgttgaagaaggagaacttagagaatataaaggc
attgcgattcaattgctggagcaatacgactctgtcaatttacttgccgcagcattcaag
ctcattacgggcgagaagagtgataaggcgtccatcgaattgactccggaagagccgatt
cgtgtgaagcgtcgtaatcctgacatccgttccagcggacgtaagccttccggctacggt
aaccgtggtggctaccgtcgcgataaccgcgagggtggaaatcgcgaaggcggaaatcgc
ggtggctacaaaggcggctacaacaaggagggtggacgcgattcctatcgcggtggttca
tccgatcgtaagccgcgttctagttacaataacggcgagcgcagaccaaagaatggtggc
agcttctccgataagtaa
DBGET
integrated database retrieval system
