Paenibacillus lutimineralis: EI981_19980
Help
Entry
EI981_19980 CDS
T06479
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plut
Paenibacillus lutimineralis
Pathway
plut03030
DNA replication
plut03430
Mismatch repair
plut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EI981_19980
03430 Mismatch repair
EI981_19980
03440 Homologous recombination
EI981_19980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plut03032
]
EI981_19980
03400 DNA repair and recombination proteins [BR:
plut03400
]
EI981_19980
Enzymes [BR:
plut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EI981_19980
DNA replication proteins [BR:
plut03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EI981_19980
DNA repair and recombination proteins [BR:
plut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EI981_19980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Herpeto_peptide
Motif
Other DBs
NCBI-ProteinID:
AZS16505
UniProt:
A0A3S9V1N7
LinkDB
All DBs
Position
complement(4507056..4510943)
Genome browser
AA seq
1295 aa
AA seq
DB search
MDSFVHLHVHSEYSLLDGAARLEDLVKRAAGLGMKALALTDHGVMYGAVPFYKLCKANGI
KPIIGCEMYFTAGSRKERGSRKDQPIHHLILLAKNLQGYQNLMRLCSIAQLEGFHYKPRI
DWEVLERHAEGLVCLSACLGGEVPQHLLHGRYEEAKRAALRYKAAFGEDFYLELQDHSIP
EQKKVNPQLIQLAEETGISLVATNDVHYLEQDDAEVQDVLICIGTGKSVEDEDRLKMNTN
QLYLKDGAQMAMLFPHVPEAIRNTAVIAEKCDLELEFGKHILPAYRPIPEGMDVVSYLET
LCQQGLVERYGGLPEWQSEEAQTSLQKRLKYELGVIANMGFSDYFLIVWDFIAFAHRHGI
ATGPGRGSSAGSIVAYVLHITNVDPMKYNLLFERFLNPERVTMPDIDIDFSDLRRDEVIA
YVADKYGSAHVAQIITFGTMAARAAVRDVGRALGVPFGEVDKVAKLIPGNLGMTIERAMK
ESPDLKGLYDSQPRIHGLLDMAMKVEGMPRHASTHAAGVVISRDPLTDAVPLQTGSEGTA
LTQYSMENLEAIGLLKMDFLGLRTLSIIERCMKWITEESGDAPDFRIIPDDDHKTYEMLG
RGETTGVFQLESAGMRRVLRDLKPSQFEDVISVLALYRPGPMEFIPNYISSKHGLSEVHY
PHPDLEPILKDTYGIIVYQEQIMQIASRMAGFSLGEADLLRRAVSKKKREVLDEQRGHFV
AGSKAQGYMEKDANAVYDMIVRFADYGFPRAHAAAYGVLAFQTAYLKAHYPVHFMASMLT
AVMGSHRKVAEYIVECRRMGIVVLPPDVNESGVLFTPRVNSTSKTGTVGNSEVINGTDTP
MNSGADSNSESNSESGEPYGVIRFGLAAIKNVGTQAMESILKERQERPFDSLLDFCRRVD
LRVCNKRVIESLIQGGAFDSLPGHRAQLLAMLDETVEAATKWRKERDDLQIQLFDFIETP
NWDIEYPEIPKFTVGQQLELERELLGLYLSGHPLDDFDELMDEDGIDRLMDLAEAADESE
AVVAGMVVSLKTIMTKQGKPMAFIELEDQIERCEVVLFPNVWRRCAPHVTKGTLLALRAT
VQQQDEGFKLLADEVAPLSAQSLTALRRGLGRRRSAAAGAGASRAGSGGATGGSTAVGAA
NAPGAVLPGGAAAAPVRGSGASEPLPAPAGAAAQAGAGPGGVEAGASGKPGTSDTLVSDA
SRAGSPADAASAAGRERKKTEQRVFIKITTAAENAGLLVQLKQLLQLHPGPLATVLFYES
TGKLLALSDLYSIKPSPDLLHEMEQMLGQDTVKIR
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atggacagctttgttcacctgcatgtacacagcgaatatagcttgctggacggtgccgcc
cggcttgaggatctggttaagagagccgctggcttaggcatgaaggcgctggcgctgacc
gatcacggagtgatgtacggtgcggttcctttttataaattgtgcaaggcaaatggaatc
aagccgattatcggatgtgagatgtactttactgccgggtcgcgtaaagagcggggcagc
cgcaaggatcagccgatccatcatctgattctgcttgcgaagaatctgcaggggtatcag
aacctgatgcgcttgtgctcgatagcgcagcttgaaggattccattacaaaccgcggatc
gattgggaggttctggagcgccatgctgaggggcttgtctgcctaagcgcatgtcttggc
ggagaagtgccgcagcatctgctgcatggccgctatgaggaagcgaagcgggccgctctg
cgctataaggcagcgttcggtgaggacttctatctggaactgcaggatcacagcattccg
gaacagaagaaggtgaatccacagctcattcagcttgctgaagagacgggaatttctctt
gtagctaccaatgatgttcactacttggagcaggacgatgccgaggtacaggatgtgctg
atctgtattggcacgggcaagagcgtagaagacgaggatcgcctgaaaatgaatacgaac
cagctctatctgaaggatggggctcagatggccatgttgttcccgcatgtgccggaagca
attcgcaatacagcagtgatcgctgaaaagtgcgatttggagctggaatttggcaagcat
attctcccggcctaccgtccgatccccgaggggatggatgtggtgtcttatttggagacc
ctctgtcaacaaggtcttgtcgagcgttatggcggtttgccggagtggcagagtgaagag
gcccagacttcactacagaaacggctcaagtatgagctgggtgttatcgcgaatatgggg
ttctccgattattttctaattgtgtgggatttcatcgcttttgctcatcgccatggcatc
gccacgggtccgggtcggggttcctctgcaggcagtatcgttgcttatgtgctgcatatt
acgaatgtagatccgatgaaatataatcttctgttcgaacgcttcctcaatccggagcga
gtgacgatgccggatatcgatattgacttcagcgatttgcgccgggatgaagtcattgct
tatgtagcggataaatatggttctgcgcatgttgctcagattattaccttcggtacaatg
gcagcgcgggcggctgtacgcgacgtaggaagggcgctgggtgttcctttcggcgaggtt
gataaggtagccaagcttatccctggtaacctggggatgacgattgagcgcgcgatgaag
gagagtccggatttgaaggggctgtatgattcacagccgcgtattcacggactcctcgat
atggcgatgaaggtagaggggatgccaaggcatgcctcgactcatgcggctggtgtagtc
atctcccgcgatccactgacagatgcggttccactgcagacgggcagtgaaggtacggcg
ctgacgcaatattcaatggagaatctcgaagcgatcggtttgctgaaaatggacttcctc
ggtttacgtacgctgtcgatcatcgaacgttgtatgaagtggatcacggaggagagcgga
gatgcaccggattttcgtatcattcccgatgatgatcacaagacctatgagatgttaggc
cgtggtgagacgactggggtgttccagcttgagtcggcgggcatgcggcgcgtgctgcgt
gatttgaagccgtcgcagttcgaggatgttatctctgttctggctctgtatcgtccaggt
ccgatggagtttattccgaattatatttcctcaaagcacggtttgagtgaggttcattac
ccgcatccggatctggagccaattctgaaggatacgtacggcattatcgtctatcaggaa
cagatcatgcagatcgcatcaaggatggctggattctcgcttggtgaagcggatttgctg
cgtcgtgccgtgtcgaagaagaagcgcgaggtactggatgagcagcgcggtcattttgtg
gccgggagcaaggcccagggctatatggagaaggatgcgaatgcagtctatgatatgatc
gtccgtttcgcggattatggcttcccgcgtgcgcatgccgcggcatacggagtgctcgct
tttcagacggcttatttgaaggcgcattatcctgtgcatttcatggcctcgatgctgacc
gctgtcatgggtagccaccgcaaggttgccgaatacattgttgagtgccgccggatgggc
atcgtcgtgttgccaccggatgtgaacgagagcggggtgttgttcacgccaagggtgaac
agtacgagcaagactggaacggtaggcaattctgaggttatcaacgggacggatacgccg
atgaattcaggtgccgattccaattcggaatcaaattcggagtcaggagagccttatggg
gtcattcgctttggtctggccgcaattaagaatgtaggcacccaggcgatggagagtatt
ctgaaggagaggcaggagcggccttttgatagtctgcttgatttctgccgccgcgtcgat
ctgcgtgtctgcaacaagcgggtgatcgagtcgctgattcagggcggagcgtttgattcc
ttacctggacatcgtgctcaattgctggcgatgctggatgagacggtggaagcagcgacg
aagtggcgtaaggaacgggatgatctgcagattcaattgttcgatttcattgagacgccg
aactgggatatcgagtatcctgagatccctaagtttactgtagggcagcagctcgaactg
gagcgtgagctgctcggattatacttatccggccatccgctggatgattttgatgagctg
atggatgaagacggcatcgatcggctgatggatttggctgaggcggcagatgagagtgag
gcggttgtagcggggatggttgtctcgctgaagacgatcatgaccaagcaaggtaagccg
atggctttcatagagctggaagaccaaatcgagcgctgcgaggttgtcttgttcccgaat
gtgtggcgacgctgtgcgccgcacgtaacgaagggcacgctgctcgcactgcgcgctacg
gtccagcagcaagacgaaggcttcaagctgctggccgatgaggtggcgccgttgagcgca
cagagcctcaccgcgctgcggcgcgggcttggccgccggcgcagtgcagcggcgggggct
ggcgccagccgcgctggaagcggcggggccacaggcgggagcaccgcggtgggcgccgcc
aacgcacctggcgcggtgctcccgggcggtgccgccgccgcgcctgtgcgcggcagcggc
gctagtgagccgctgccggccccggcaggcgcagcggcgcaagcgggcgctggccccggc
ggcgtggaagccggcgccagcggcaaaccgggaacgtcggatacgctggtatccgacgct
tcccgtgcaggcagccctgcggatgctgccagtgcggcggggcgagagcggaagaagact
gaacaacgcgtcttcatcaagatcacgacggcggcggagaacgccggcctgcttgtgcag
ctgaagcagctgcttcagctgcatcctggcccactggccacggtgctgttctacgagagc
accggtaagctgctcgcgctttcggatctctacagcatcaagccatcgcctgatttgctc
cacgagatggaacaaatgctagggcaggatactgtgaagatcagataa
DBGET
integrated database retrieval system
