Paenibacillus lutimineralis: EI981_22475
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Entry
EI981_22475 CDS
T06479
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plut
Paenibacillus lutimineralis
Pathway
plut03420
Nucleotide excision repair
plut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EI981_22475
03430 Mismatch repair
EI981_22475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plut03400
]
EI981_22475
Enzymes [BR:
plut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EI981_22475
DNA repair and recombination proteins [BR:
plut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EI981_22475
MMR (mismatch excision repair)
Other MMR factors
EI981_22475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_19
PhoH
AAA_30
Viral_helicase1
SLFN-g3_helicase
DEAD
AAA_11
ResIII
nSTAND3
AAA_16
NACHT
Catalase_C
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AZS16953
UniProt:
A0A3Q9IBH1
LinkDB
All DBs
Position
complement(5073271..5075397)
Genome browser
AA seq
708 aa
AA seq
DB search
MSEFQSAYQEEERKLDRALASIDDQLQQLRSIPVYIGDDFTEQALEASREGQRQKLIQSA
QEPYFGRLDFEESGREFMPLYIGKAGVSDTVGKQPMVIDWRAPVASLFYSFTGGDSASYE
APEGLIEGKVSLKRNIVIRQRKLERVVDTFNENADTPGVSDEFLVYRLGENKDNRLRDIV
STIQAEQDQIIRALKNTALIIQGVAGSGKTTVALHRLAYLLYQYKEQIRAERMVIFAPNL
MFIDYISEVLPELGVGDIQQCTFTDWAAKVIGLMTVPADGSAGLMRWFDDHARKQEIRTE
QIYPGRYKGSMEFKNLLDDYLLRIEAECVPQVDFEPWDGNRLSRAEILEWFEGEYKYYPV
ARRKERLLARIHRWVEMELKKSPSAAALKERKKKAQQREKAYAKKWPELDSFQLYRNLFQ
MKKNADFAVEDLQARIPAAVWKETKDSLKNGTVQEDDLAALLYLFAGVNELDSTLTFDHI
VIDEAQDFSPFQVAVLDRFVKGHSFTILGDLSQGIHYYKGIDDWQEMQGLFAQEETAYFA
LTRSYRSTMEIIEYANEILKRGVGTDLLAVPVFRSGDPVRLEHAQSGESKLKLIKQALTK
VLNGEYRTTAILTRTLDEAKQMYESLTAEGLIANLIDGDKTQYAGGISVLPVYLSKGLEF
DAVIVTDVDAQHYGPQDAKLLYVGCTRALHELWLLYGDQIPEYVVTEV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaatttcaaagtgcctatcaagaagaggaacggaagctcgaccgtgccctggcg
agtattgatgatcagctgcagcagcttcggagcatcccagtctatataggggatgatttc
acggagcaagctcttgaggcaagcagggaaggacagcgtcagaagctgatacagtccgca
caggagccttattttggacgcttggattttgaggagtctggccgggaatttatgccgctc
tatattggaaaagcgggcgtgagcgatacagtgggcaagcagccgatggtgatcgattgg
cgggctccagttgccagtttattctattcttttaccggtggggattcagcctcatacgag
gctccagaagggttgatcgaaggcaaagtctcgctgaaacggaatatcgtgatccgtcag
aggaagctggagcgggtcgtggatactttcaatgagaatgccgacactcctggggtgtct
gacgagtttctcgtctatcgacttggtgagaataaggataaccgactgcgcgatatcgtc
tcgacgattcaggcggagcaggatcagattatccgtgctctgaaaaataccgcgttgatt
attcaaggggtcgcagggagcggtaagacgacagttgcccttcatagattggcttatttg
ctatatcagtataaggaacagattagagcggagcggatggttatattcgctccgaactta
atgtttatcgattatatctccgaagtgctgcctgagcttggcgttggtgatattcagcag
tgcacatttaccgattgggccgctaaggtgatcggacttatgacagtaccagcggatggt
tctgcggggctgatgcgctggttcgacgatcatgcacggaagcaagagatacggacggaa
caaatttatcctggcaggtataaaggctcgatggagttcaagaatttattggacgattat
ctgctgaggatcgaggcggagtgtgtgcctcaggttgattttgagccttgggacggcaat
cggctgtcacgtgcggaaatcttggagtggttcgaaggggagtataaatactatccagtg
gctcggcgcaaggagcggttgttggcccggattcatcgctgggttgaaatggagctgaag
aaatctccttcggctgcggcattgaaggaacggaagaagaaggcgcagcagcgcgagaag
gcttatgcgaagaaatggcccgagctggattcgttccagttgtaccggaatctgttccag
atgaagaagaatgctgattttgcggtggaggatttacaagctcgaatcccggccgcggtc
tggaaagagacgaaggacagcttgaagaatggaaccgtgcaggaagacgatttagccgca
ctgttgtatctcttcgccggagtcaatgaattggatagcacgctaacctttgaccacatc
gtaatcgatgaggcgcaggatttcagtcctttccaggtggcagtgctggaccggttcgtg
aagggtcattcttttacaatattgggggatctgtcgcagggcattcattactacaaagga
attgatgattggcaagagatgcaggggctattcgctcaagaagagacggcgtatttcgct
ctaacccggagctatcgctcgacgatggaaattatcgagtatgccaatgagatattgaag
cgcggagtaggtactgacttgctggctgttcccgtattccgcagtggcgatcctgttcgg
ctggagcacgcgcagtccggtgagagtaagctgaagctgattaagcaggcattaaccaaa
gtattgaatggcgaatatcgcacaacggcgattcttacaagaacgttggatgaggcgaag
cagatgtatgagtcgcttacggctgagggattgatcgctaacttgatcgatggagacaag
acgcaatatgcggggggaatctcggttcttccggtgtatttgtccaaggggcttgaattc
gatgccgttattgtcacggatgtagatgcgcagcattatgggccgcaggatgcaaagttg
ctgtatgtcggatgcacacgggccctgcatgaactgtggctgctgtacggggatcaaatt
cctgagtacgtggtgacagaggtatag
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