Paenibacillus lutimineralis: EI981_24585
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Entry
EI981_24585 CDS
T06479
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plut
Paenibacillus lutimineralis
Pathway
plut03420
Nucleotide excision repair
plut03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EI981_24585
03430 Mismatch repair
EI981_24585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plut03400
]
EI981_24585
Enzymes [BR:
plut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EI981_24585
DNA repair and recombination proteins [BR:
plut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EI981_24585
MMR (mismatch excision repair)
Other MMR factors
EI981_24585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
DUF6933
DUF7790
JmjN
Rttp106-like_middle
Motif
Other DBs
NCBI-ProteinID:
AZS17291
UniProt:
A0A3Q9IC20
LinkDB
All DBs
Position
complement(5534090..5536327)
Genome browser
AA seq
745 aa
AA seq
DB search
MYNRSINQERPTQFIVRKQAELSIQLNEVQREAVLLTEGPLLLLASPGSGKTTTMIMRIG
YLIAEKGVHPARIKAVTFSRAAAQDMKSRFSAFFPELAPVQFSTIHSFAFEVVREYLRKC
RIDFQIIEGHIDPEEEEGAEAEHLPLHKRIILRQIYQSIHSDNITDDQMDELTTYISYIK
NKMLPAEHWSEIKVDVPKAEQIFRAYEEFKQRDRTRLLLDFDDMLTLANRALNEDASLLR
KYQMRYDYVLTDESQDTSLVQHAIIEKLVQRHHNLCVVADDDQSIYSWRGAEPSYLLDFK
QVFPKAQILYMEQNYRSSRDVVHAANRFIKRNKHRYNKKMFTHNPPHEPIRFTCLADDTS
QGDYLVREIAGQDNLAEIAILYRNNSSSVGLMNALDLAGIPFYLKDSDLRFFSHWVVEDV
LNFMRLTFTDKRVDVFEKIHMKFNGYISKKQMQEVKLIHNQESVFDNLLDHVPLQEYQVK
LLQESKETFQQMRGMPPKAVIQVIRGRLGYEKALEKMCERLGFRQDTLIGILNTLEQIAA
PQTTMEEFAARLKYLESLQKTAKRRRGQNVVTLSTLHSAKGLEFDRVYMIDLVDGILPSY
EDLKDQSENLAQMEEATRLFYVGMTRAKRTLNLVTYQEREGKKAVESRFVNDIRRIVNPA
APQIVRGEKSTVKLKKPEIVYRPNAIRSVNDFVVGKRVKHSRFDEGVITKVYEDRLEIQF
EAGDKVLSVKACLEMGLLERAVEDI
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtataatcgctcaataaatcaagaaagacctacccaatttatagttcgtaaacaggct
gagcttagtattcaattgaatgaggtccagcgggaggcggttcttcttacggaaggaccg
ctgctgctgctggcctcgcctggatcaggcaagacaacgacgatgattatgcgcatcggc
tatttgattgcggagaaaggggtacaccccgcacgaattaaggcggtaacgttcagcagg
gctgctgcacaggatatgaagtcacggttcagcgcctttttcccggaacttgctcccgta
caattttctacgattcacagctttgcctttgaagtggtcagagaatatttgcggaagtgc
cgaatcgactttcagatcattgaagggcatatcgatccggaggaggaagagggggccgag
gcagagcatctgccactgcacaagagaattattttgcggcaaatctatcagtctattcac
tcggataacatcaccgacgatcagatggacgagttaacgacctatattagctatattaaa
aataagatgctgcctgccgagcattggtcggagattaaagtggatgttcctaaggcagag
cagatttttcgtgcatatgaagagttcaagcaaagggatagaacaaggctgctgcttgac
tttgatgatatgctgacgctcgcaaatagggccttgaatgaagatgcctcactgctgcga
aagtatcagatgagatatgattatgtgctgaccgatgagagccaggatacctcgcttgta
cagcacgctattatcgagaagctggtgcagcgccatcacaatctgtgtgtcgttgctgac
gatgatcagtcgatttatagctggcgaggggctgagccgtcttatttgctggatttcaaa
caagtatttcccaaggcgcagatcttgtatatggagcagaattatcgctcttccagggat
gttgtacatgctgctaaccgcttcattaaacgcaacaagcatcggtataacaagaagatg
ttcacccacaatcctccgcatgagccgatccgcttcacctgtctggctgatgatacttcc
caaggcgactatctagtacgggagatcgcagggcaggacaatctggcggagattgcgatt
ctgtaccgcaacaattcgtcctccgtcggattgatgaatgcactcgatctggccggaatt
cctttctatctaaaggattccgatctgcgcttcttctcccattgggtcgtggaggatgta
ctgaacttcatgaggcttacgttcaccgataagcgggtcgatgtctttgagaagatccat
atgaaattcaatggctatattagcaaaaagcagatgcaggaggtcaagctgatccacaat
caggaatcggtcttcgacaatctgctggaccatgtgccacttcaggaatatcaagtgaag
ctgctgcaggagagcaaggagacgttccagcagatgcgcggaatgccgccgaaggctgtg
atccaagtgattcgcggccgtctcggatatgagaaggcactggaaaagatgtgcgaacgc
ctcggcttccgccaagatacgctgatcggtattttaaatacactagagcaaatagcggct
cctcagacgactatggaagagttcgcagcccggctcaaatatttagagtcgcttcagaag
acagcgaagcggcggagagggcagaatgtcgtgaccttgtctacgctgcacagtgccaaa
ggcttggagttcgatcgtgtctacatgatcgatctggtcgatggaattttgccttcttac
gaggatttgaaggatcagtctgagaatcttgcccagatggaggaagcgacccgtctgttc
tatgtaggtatgacgcgggcgaagcgcacgctgaatttggtaacctatcaggaacgggag
ggcaagaaggctgtggaatcccgctttgtgaatgacatccggaggattgtgaatccggca
gctcctcagatcgtgcggggggagaaatctacagtgaagctgaagaagccggagatcgtc
taccgtccgaacgcgatccgaagtgtgaatgacttcgttgttggcaagagagtcaagcat
tcccgctttgacgagggcgttatcacgaaagtctatgaggataggcttgagatccagttt
gaagcgggggataaggtgctatccgttaaggcatgtctcgaaatgggattgcttgagcgg
gcagttgaggacatatag
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