Paenibacillus larvae: ERIC2_c02660
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Entry
ERIC2_c02660 CDS
T02963
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
plv
Paenibacillus larvae
Pathway
plv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ERIC2_c02660 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plv03019
]
ERIC2_c02660 (rnr)
03016 Transfer RNA biogenesis [BR:
plv03016
]
ERIC2_c02660 (rnr)
Enzymes [BR:
plv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ERIC2_c02660 (rnr)
Messenger RNA biogenesis [BR:
plv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ERIC2_c02660 (rnr)
Transfer RNA biogenesis [BR:
plv03016
]
Prokaryotic type
tRNA degradation factors
ERIC2_c02660 (rnr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
CSD
OB_HELZ2
OB_RNR_1st
S1_RRP5
OB_Dis3
OB_PDCD11
FlcC_N
Motif
Other DBs
NCBI-ProteinID:
AHD04131
UniProt:
V9VZN2
LinkDB
All DBs
Position
274311..276815
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AA seq
834 aa
AA seq
DB search
MITEQDILDFMRESAYKPMTYQELEKHFQVSDAEEFKQLLKTLNGLEQEGYILRTRHDRY
GVPERMNLVRGRLQAHPKGFGFLISDDPDQPDIYIHANDMNTAMNGDTILVRITSKSVSG
GKMEGEVVRVVNRANTEIVGTFQQHESYGFVLPDDRRVQRDIFIPAAAFKGAVDGQKVVV
KIVQYPEGRAAAEGEIIEILGHKNDPGVDILSIIRKYGLPEAFPDEVMEEALAVPEKITE
EEIRGRRDLRDKRIVTIDGEDAKDLDDAVNVERLPNGNYLLGVHIADVSYYVKENSALDR
EAYSRGCSVYLVDRVIPMLPHRLSNGICSLNPQVDRLTMSCEMEFDQHANVVRHDVFTSV
IKTSERMTYNNVRQILSSEEPELLERYDYLIDDFKLMEELAMKLRNKRMKRGAIDFDFQE
SKVLVDENGKPYDIIKRERSIAEMIIEEFMLAANETVAEHFHWLKVPFLYRVHEEPDAEK
LMHFMEFITNFGYVVRGRGNNIHPGSLQTLLEEIKGKKEETVISTVMIRSMKQARYDSHS
LGHFGLAAEFYSHFTSPIRRYPDLVIHRIIREVLEKGSFSEQRHEYLKGRMEYIARQSSE
RERKAVDAERETDALKKAEFMLDKIGEEFEGIVSSVTSFGMFVELENTVEGLIRLSGLTD
DYYHYHEMQHALIGERTSNIYRIGDEVKIRVTAVNMDEHTIDFEMVDMKPRSRKYNVVER
SQSRGRGKRSVKSGFVSRKGKKGSKDIVGIAKGDKSAKKAGKTAKSGKAGKADKVKAAAG
KRSSGKKKRNGESTPGGEQRVQKAEGPAEGFGGDWANTVNALGKNARAAKKRRK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgataacagaacaagatattttggattttatgagggaaagtgcttataagccgatgacc
tatcaggaactggagaaacactttcaggtctcggatgcggaagagtttaagcaattgctt
aaaaccttaaacggacttgagcaagaaggctatattttgcgtacacggcatgaccgttat
ggagtaccggaaaggatgaacctggtaagaggccgtctgcaagctcatcccaaaggattc
ggttttctgatttccgatgatcctgatcaaccggatatatatattcatgctaatgatatg
aacacggcgatgaatggcgataccattttggttcggattacatcaaaaagtgtctccggc
gggaaaatggaaggggaagttgtacgggtcgtcaacagggccaataccgagatcgtagga
acctttcaacagcatgaaagttacggttttgtacttccggatgacagaagggtacagagg
gatatttttattccggcagcagcatttaaaggagcggttgacgggcaaaaagtagtggtc
aagatcgtgcagtatccggagggacgggctgcggccgagggagaaattattgagattttg
gggcataagaatgatcctggcgtagatattttgtccattattcgcaaatacgggctgccc
gaagctttccctgacgaggtaatggaggaggcccttgctgtccccgagaaaatcacggag
gaagaaatccgcggaagaagggatttaagggacaagcgcatagtaaccatcgatggtgag
gatgcgaaagatctggatgatgcagtaaatgtggaacgtttgccgaacggaaattatctg
ctcggtgttcatattgcggatgtcagttactatgtgaaggaaaattcagcacttgaccgg
gaggcttatagccggggatgttccgtttatttggttgaccgggtaatcccgatgcttccg
cacaggctatccaacgggatatgttctttaaatccccaggtagaccggcttaccatgtcc
tgtgaaatggaatttgaccaacatgcgaacgtagtccggcatgatgtatttacaagtgtg
ataaagacaagtgaacgtatgacttataacaatgttcgccagattttaagcagtgaagaa
ccggaattgctggaacgctatgattatttgatagatgatttcaaactgatggaagagctc
gcgatgaaacttcgcaataaacggatgaagcggggggccattgattttgattttcaggag
tctaaggttttggtcgatgaaaatggtaaaccctatgacattatcaagcgtgaacgctcc
atagcggaaatgattattgaggaatttatgctggctgcaaacgaaaccgtcgcggaacat
ttccattggctgaaggtaccttttctttaccgtgtacatgaggagccagatgcggagaaa
ctgatgcactttatggaattcattacgaatttcggttatgtagtgcggggcaggggcaac
aatatacatccagggtctttacaaacactgcttgaggaaatcaaaggaaaaaaggaagag
accgttattagtacggtgatgatccgttctatgaagcaggcgcgttatgactcccatagt
ctggggcattttggcctggctgcggagttttattcccactttacgtctcccatccgccgc
tatcctgacctggtgattcatcgtattatccgggaagtgttggagaagggatccttttcc
gaacaaaggcatgagtatctgaaaggccggatggaatatattgcccggcaatcttccgaa
cgggaacgtaaagctgttgatgccgaacgggaaacagatgcactcaagaaagccgagttc
atgctggataaaatcggggaagaatttgaaggaattgtatccagtgtgacaagcttcgga
atgttcgttgagttggaaaataccgtagagggattgatccgtttaagcggtttgacggat
gattactatcattatcatgaaatgcaacatgccttgatcggggaacggacttctaatatt
taccggataggcgatgaggtgaagatccgtgtgactgccgtaaatatggatgagcatacc
atcgattttgagatggtcgatatgaagccgcgctcccggaagtacaatgtggtggagcgt
agccagagtaggggccggggtaagcgaagcgtcaagtccggctttgtatcacgcaagggc
aaaaaaggcagcaaggacatcgtgggcatagctaaaggtgacaagtccgccaagaaagcc
ggaaaaaccgctaaatcgggcaaagcaggaaaagcggacaaggtaaaggctgccgcaggc
aaacgttcctccggcaagaaaaagcggaacggggaaagcacgccgggcggtgaacagcgc
gtacaaaaagccgaaggtccagcagaaggcttcggcggtgattgggcgaatacagtaaat
gcactcggcaagaatgcccgtgctgccaagaagcgccgcaagtag
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