Paenibacillus larvae: ERIC2_c08410
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Entry
ERIC2_c08410 CDS
T02963
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
plv
Paenibacillus larvae
Brite
KEGG Orthology (KO) [BR:
plv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plv03009
]
ERIC2_c08410 (rlmCD)
Enzymes [BR:
plv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ERIC2_c08410 (rlmCD)
Ribosome biogenesis [BR:
plv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ERIC2_c08410 (rlmCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
MTS
Methyltransf_15
PrmA
Methyltransf_11
N6_N4_Mtase
Methyltransf_32
Ubie_methyltran
PCMT
Methyltransf_12
RrnaAD
TPMT
Collagen
Motif
Other DBs
NCBI-ProteinID:
AHD04674
UniProt:
V9W3Y7
LinkDB
All DBs
Position
826924..828501
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AA seq
525 aa
AA seq
DB search
MKPNKRSGGRASRPRKFQDRTRPAKSHISAAKQELPVEKNGIYTAEVIGIGHDGEGVGRV
NGFTLFIRGVLPGEKAEVKVLKVKKQFGYAKLLRVLEPSPGRVQPPCAIYHQCGGCQLQH
LSYDGQLKVKRQLVVDNLERIGKLRVMDGARMDGDAWNDGNAGNVVEAGNDGNAGNAGKA
ENIGLQNKHGETEDKRVTRIARVWDGEGVTVHPTLGMSEPWRYRNKSQVPFGEEEGGLIG
GFYAQGSHRIIDMETCLIQHEQNDDVVRIVKETGTHLGINAYNETNHTGLLRHVVVKYGF
RTGELMIVLVTNGKRIPHAEQWITAIREKLPAVQSICQNINMARTNVIFGDETKVLWGRE
VIYDYIGDVKFAISPRSFYQVNPVQTEVLYRKTLEYAGLTGKETVVDAYCGIGTISLFLA
KHARKVYGVEIVPEAIEDAKRNAELNGVSNAEFAAGKAEEVLPGWQRAGVRPERVVYVSC
NASTLARDLRVLEDGGYRTVEVQPVDMFPHTVHVECVALLIYKGF
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgaacaaacggtccggcggccgggcatcccgcccgcggaaattccaggaccgt
acacgtcctgcaaaatcacatataagcgcggccaagcaagagcttccggtggagaagaac
ggcatctataccgcggaagtaataggcatcggccacgacggggaaggggtaggccgtgtg
aacggctttaccctttttatccgtggagtacttcccggtgaaaaagccgaggtaaaggta
cttaaagtcaaaaagcagtttggttacgccaagctgcttcgtgtacttgagcccagcccc
ggccgtgtacagcccccttgtgctatctatcatcaatgcggcggctgccaactccagcat
ctcagctacgacgggcagcttaaggtaaagcggcagcttgtcgtggacaacctggagcgg
attggaaagctgcgggtgatggatggagcaaggatggacggggatgcctggaatgatgga
aatgctgggaacgttgtggaagccgggaatgacggaaacgccgggaatgctgggaaagcc
gaaaatatcggacttcaaaacaaacatggagaaacagaagataagcgggttactagaatc
gctcgagtttgggatggtgaaggtgtaaccgtgcaccctactctgggtatgtccgagcct
tggcgataccgcaacaaatcgcaggttccttttggtgaggaagaaggcggtttgatcggc
ggcttctacgcccagggcagccaccgtatcattgatatggagacatgccttatccagcat
gagcaaaatgatgatgtggtccggatagtgaaggagaccggaacccatttaggcataaac
gcctataacgaaacgaatcacaccggattgctccgccatgtggtggtcaagtatggtttc
cgtacgggagagctaatgattgtgctggtgacaaacgggaagcggattcctcacgcagag
caatggataaccgcaatacgcgagaagctgcctgccgtgcaaagcatctgccagaacatc
aatatggcccgtacgaacgtgatttttggggatgagaccaaggtcctgtggggccgtgaa
gtcatctatgattatatcggcgacgtgaagtttgccatctcgccgcgctcgttctatcag
gtcaatcccgttcaaacggaagtgctgtacaggaagacactggaatacgccgggctaacc
ggcaaagagaccgtggtggacgcttattgcggcatcggtacgatctccctgttcctggcg
aaacatgccaggaaggtatacggcgtcgagatcgtgccggaggcgatcgaagatgcgaag
cgcaacgcggagctgaacggagtcagcaacgcggagttcgctgccgggaaggccgaggag
gtccttcccggctggcagcgggcgggcgtacgcccggaacgggtggtgtatgtgtcgtgc
aacgcatcgacactggcccgcgacctccgcgtgctggaggacggcggttaccgcaccgtg
gaggtgcagccggtggacatgttcccgcatacggtacatgtggagtgtgtggcgttgttg
atttataagggtttttag
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