Paenibacillus larvae: ERIC2_c13520
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Entry
ERIC2_c13520 CDS
T02963
Symbol
hupA
Name
(GenBank) DNA-binding protein HU 1
KO
K03530
DNA-binding protein HU-beta
Organism
plv
Paenibacillus larvae
Brite
KEGG Orthology (KO) [BR:
plv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plv03032
]
ERIC2_c13520 (hupA)
03036 Chromosome and associated proteins [BR:
plv03036
]
ERIC2_c13520 (hupA)
03400 DNA repair and recombination proteins [BR:
plv03400
]
ERIC2_c13520 (hupA)
DNA replication proteins [BR:
plv03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ERIC2_c13520 (hupA)
Chromosome and associated proteins [BR:
plv03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ERIC2_c13520 (hupA)
DNA repair and recombination proteins [BR:
plv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ERIC2_c13520 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Peptidase_C80
HU-CCDC81_euk_1
HU-DNA_bdg
Rpf1_C
SIS_2
VWA_3
PaaA_PaaC
Motif
Other DBs
NCBI-ProteinID:
AHD05180
UniProt:
V9W692
LinkDB
All DBs
Position
1286972..1287244
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AA seq
90 aa
AA seq
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MNKSDLIAKVAEASELSKKDATKAVDAVFEAIAEALKEGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIAASKVPAFKPGKALKEGIQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatctgatttgattgctaaggtagcagaagcctccgagctttccaagaaagac
gctacaaaagcagtggatgctgtttttgaggcgattgctgaagctttaaaagaaggtgac
aaggttcaacttgtcggttttggtaacttcgaagtccgtgaacgttccgcacgcaaagga
cgtaacccgcaaaccggtgaagaaatcgaaatcgctgcaagcaaagttccggctttcaaa
cctggtaaagctttgaaagaaggcattcaataa
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