Paenibacillus larvae: ERIC2_c25430
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Entry
ERIC2_c25430 CDS
T02963
Symbol
sbcC
Name
(GenBank) nuclease sbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
plv
Paenibacillus larvae
Brite
KEGG Orthology (KO) [BR:
plv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plv03400
]
ERIC2_c25430 (sbcC)
DNA repair and recombination proteins [BR:
plv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ERIC2_c25430 (sbcC)
Archaeal homologous recombinant proteins
ERIC2_c25430 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
AHD06332
UniProt:
V9WB46
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All DBs
Position
complement(2546708..2550160)
Genome browser
AA seq
1150 aa
AA seq
DB search
MRPITLTLSGLQSYREKQEVDFTRLCDAGVFGIFGPTGSGKSTLLDAITLALYGKVERAS
SGTQGIMNQAENSLAVSFIFELSHAGGSTRYRVERQFKRGSGVSATGVVSRLILEDPHNP
ENSTVLADKATEVTQQVQDILGLSMQDFTRAVVLPQGKFAEFLSLTGKDRRQMLQRLFHL
ELYGDQLTVKISLRMKEAEQRLKELSAEQQGLGDASEEALKKAEKELVLAQCEGGRLKRE
LGQDEQEYEEQKQVWQWVKDRERVLEERDKLAENEDKIREKEVKVRLAGEADRLLPYLTR
QEKSARLVTDQRTQLQASCERLEYSTAREKAARRFMEQCQAELQEREYPLLKKLEKLQEA
LQLEKELDELKKQMDTLKAQEALARDEASKTASELQTGIGRRQKGLEKQAALKEELRQTE
VPFEESRRIQSAYSESIHVKEAERLVLEQEEEARKHRKFADQAEQTWKMAEEKFQAIGQD
LLKALPEVARQLHGSSLSVKKSGHLLEQAGNLLESYKQKLKQEERQSLAAVLAEELREGC
ACPVCGSMSHPSPAHYESTLNGIKEWEAKIVKVEELRESLRGLNQAFGQQEAFWSGLSRQ
WLELLPETAASYWQETATAIEGNLVGEMLKDSLEPDGQIEQIGLITSSLQEELLQMVHSR
QEKEQQTALFKKDLSLFQQQAGEISSRYKLAVERAESEESRLRERKERLNQLVTLWNESY
PGLSMGEIAEQMKLLSDKEEKAAELRSRLDKSVPFLEQLERDIEEWRSRAAELDKTVLQL
QTRLEGQQQLAEAKAVELRSRVGEADAPSLIRQAEEQLSTLREQEQQAKQSQEAALEGLQ
QAAREHSAAERGLAAAEQQLKEAQQAFAEVLAESGFAEEKSVKAAVLAKEQQLEWQELIE
RYREHERELRLQLRELDGKLLGRTMSSEQWAAAERQMREIRERYEVALTDLAKAEYTVQD
LRTRHEQWVKLEQHRADTAVKYKRLSKLQSVCKGNAFVEFLAEEQLVQVSRAASDRLGQL
TRQRYAIEVDSGGGFIMRDDGAGGVRRPVSTLSGGETFLTSLALALALSAQIQLKGQYPL
EFFFLDEGFGTLDPELLDMVVTALEKLHTDKLSVGVISHVPELRARLARKLVIHPAEPLG
RGSRIELEVL
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccattacattaactttatcggggctgcaaagttaccgggaaaagcaggaagtg
gactttacacggctttgcgatgcgggggtgttcgggattttcggtccaacaggcagcgga
aaatcgacccttctcgatgcgataacacttgctctgtacggaaaagtggagcgggcatct
tccggtactcaaggcatcatgaatcaggcggaaaattcccttgcagtttccttcattttt
gaactgtctcatgcaggaggttcgacaagataccgggtagaacggcaattcaagcggggg
tcgggggtttcggcgaccggggtagtcagccgccttattctggaagatccccataatcca
gagaacagcactgttctggcggacaaagcaacagaagttacccagcaggtacaggatatt
ctggggctttccatgcaggactttaccagagccgtggtattgccgcagggaaagtttgca
gaatttctgtcactgaccggcaaagaccggagacaaatgctgcagcggctgttccacttg
gaactgtacggggatcagcttaccgtaaaaatcagtctaagaatgaaagaagccgaacaa
cggctgaaagagttatcggcagaacagcaggggttaggagatgcttcagaggaagcgctg
aagaaagccgaaaaagaactggtcctcgcccaatgtgagggcggcaggctgaagagggaa
cttggacaggatgaacaggagtacgaggaacaaaagcaggtatggcagtgggtgaaggat
agggaacgggttttggaagagcgggataaattggcggaaaatgaagataaaatccgggag
aaagaagtaaaggtccgtctcgcaggagaagcggataggcttctcccctatttgacacgc
caggaaaaatcagcccgactggtaacggatcagcgcacgcagcttcaggcatcatgcgaa
cgattggaatattcgacagcacgggagaaggcagccagacgtttcatggaacagtgccag
gccgaactgcaagaacgggaataccctcttctgaagaagctggagaaactgcaggaagcc
cttcaattagagaaggaactggatgaattaaagaaacaaatggatactcttaaagcgcag
gaggccttggccagggatgaagcttctaaaaccgcctctgaactgcaaaccggaataggc
cggaggcagaagggactggagaagcaggccgcacttaaagaagaactcagacagaccgaa
gtaccctttgaagaaagcaggcgtattcagtcggcttacagcgaaagtatccatgtaaaa
gaggcggaacgcctggtccttgagcaggaagaagaggcacggaagcatcgaaagtttgcc
gaccaggctgaacagacatggaaaatggccgaggaaaaatttcaagcaattggccaggac
ctgctgaaagctttgcccgaagtagcaaggcaactgcacggaagttccctttccgtcaag
aagtcggggcatctgctggaacaggccggcaacctgctcgaatcttataaacagaaactg
aaacaagaggagcggcagtctttggcagctgttctcgcagaggaactacgtgaaggttgt
gcttgtccggtttgcggatcaatgtcccatccgtcccctgcccattatgaatccactttg
aacgggatcaaggaatgggaagcaaagatagtcaaagtggaggaactacgtgaaagttta
cgcgggctgaaccaggcgttcgggcaacaggaagcattctggtccgggctgtcccggcaa
tggctggaactgcttccggaaacggcggcctcttattggcaggaaacggcaacggcaata
gaggggaatcttgtaggggagatgctgaaagacagtcttgaaccggatgggcaaatagaa
caaatcggcctgattacttcatcgcttcaagaggagcttctgcaaatggtccattcccgg
caggaaaaggaacagcagactgctttattcaaaaaggatctatccctatttcagcagcaa
gccggggagatatcatccagatataaactggctgttgaacgggccgagagtgaagaatcc
aggcttagagaacggaaggagcggctgaatcaactcgtcaccttatggaacgaaagctat
cccggcctttcaatgggcgagatcgctgaacagatgaaattgctctcggacaaagaagag
aaggcggctgaacttaggagccggctggataagagtgttccgttcctggagcagttggag
cgggatattgaagaatggcgatcccgtgcggctgaacttgacaaaacagtgctccagctg
caaacacgtctggaaggccagcagcagctcgctgaggccaaggcggtcgagcttcgttcc
cgcgttggcgaagcggatgcgccatcgcttatccggcaagctgaggagcagttgagcact
ttgcgtgagcaagagcagcaggcaaagcaatctcaggaagctgcgcttgaagggctacag
caggctgcccgcgagcacagtgcggccgaacgggggcttgccgcggctgaacagcagctc
aaggaagcgcagcaagccttcgcggaggtattggccgagtcggggttcgcagaagagaag
tctgtgaaagctgcggttctagccaaggagcagcagcttgaatggcaggaactgatagag
aggtaccgtgaacatgagcgtgaacttcggctccagttgcgcgagttggacgggaagctt
ctgggacgaacgatgagttcggagcaatgggcggcggccgagcggcagatgcgtgaaatc
agggaacggtatgaggttgcgttaaccgatctagccaaagctgagtacaccgttcaggat
ctgcgcacgaggcatgaacaatgggtaaagctggagcagcatcgggcggataccgcggtt
aagtacaaacgactcagcaagctgcaatcggtatgtaaaggtaatgctttcgtcgaattt
ttggcagaggagcagcttgtgcaggtaagcagggcggcttccgaccggctgggtcaactg
acgcggcagcgctatgcgattgaagttgattcaggagggggatttattatgagggatgat
ggggctggcggagtacggcgtcctgtcagcaccctctcaggaggcgaaacgttcctgact
tcactcgctttagccctggctttatcagcgcaaattcagctcaaagggcaatatccgctc
gagttctttttcctggatgaagggttcggtacgctggacccggaactccttgatatggtg
gttacggctttggaaaaactgcatacggacaagttgtctgtaggagtgatcagccacgtg
cctgaactaagagccagacttgcgagaaagctcgtaattcatcctgccgaacccttggga
aggggcagtcggatcgaactggaagtcctgtaa
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