Paenibacillus larvae: ERIC2_c38580
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Entry
ERIC2_c38580 CDS
T02963
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
plv
Paenibacillus larvae
Pathway
plv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
plv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ERIC2_c38580 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plv03021
]
ERIC2_c38580 (rpoB)
03400 DNA repair and recombination proteins [BR:
plv03400
]
ERIC2_c38580 (rpoB)
Enzymes [BR:
plv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ERIC2_c38580 (rpoB)
Transcription machinery [BR:
plv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ERIC2_c38580 (rpoB)
DNA repair and recombination proteins [BR:
plv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ERIC2_c38580 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AHD07548
UniProt:
V9WBH6
LinkDB
All DBs
Position
complement(3776255..3779797)
Genome browser
AA seq
1180 aa
AA seq
DB search
MKLAGHLVQYGRRKRRTYARINEVLEIPNLIEIQQKSYQWFLDEGLREMFQDISPIQDFT
GNLVLEFIDYSLGEPKYTVDDSKERDVTYAAPLRVKVRLINKETGEVKEQEVFMGDFPIM
TETGTFIINGAERVIVSQLVRSPSVYYNTKVDKNGKKAFTATVIPNRGAWLELETDAKDI
IYVRIDRTRKIPVTVLLRALGFGTDAEILDLLGDDEYIRNTLDKDNTDSTDKALIEIYER
LRPGEPPTLDNARSLLYARFFDPKRYDLANVGRYKINKKLHIKNRLFNQRLAETLVHPET
GEIIAEAGQLVDRRLLDEILPCLEEGVGFKEYSVPNGVLESDHIPMQTIDVFSPIEDGKV
VKVISNGVIDKNVKNITPADIISSINYFINLLHGIGNTDDIDHLGNRRLRSVGELLQNQF
RIGLSRMERVVRERMSIQDANVITPQALINIRPVIASIKEFFGSSQLSQFMDQTNPLAEL
THKRRLSALGPGGLTRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLSTFARINEY
GFIEAPYRRVDPKTGVVTDEIVYMTADEEDNYVVAQANAELNEDGTFAADNVYVRYKDEI
LTLPKERVDYMDVSPKQVVSVATALIPFLENDDSNRALMGSNMQRQAVPLLMPKAPLVGT
GMEYKAAKDSGVCVVAKHDGIIEKVSGNEIWLRRQEEVDGRLVSGNITKFKLHKFMRSNQ
GTCINQRPLVLEGQRVKAGDILADGPSTEQGELALGRNVVVAFMTWEGYNYEDAILLSEK
LVKEDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALKNLDERGIIRVGAEIGAGD
ILVGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGTDGIVVDVKVFTRENGDE
LPPGVNQLVRVYIAQKRKISQGDKMAGRHGNKGVIARILPEEDMPFLPDGTPVEVVLNPL
GVPSRMNIGQVLEVHLGMAAKQLGIHVATPVFDGAHEYDVFDTMEEAGMQRNGKTKLYDG
RTGEEFEREVTVGVMYMIKLAHMVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEV
WALEAYGAAYTLQEILTVKSDDVVGRVKTYESIVKGENVPEPGVPESFKVLIKELQSLGM
DVKILSGDEEEIEMKELDDEDDAGSDKLNLNLEGAEMGAE
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaagttggcgggacatcttgttcaatatggtcgacgtaaacgcaggacttatgcacga
attaatgaggtgcttgagatccctaacctgattgaaatccaacaaaaatcataccagtgg
tttttggatgagggtctgcgtgagatgtttcaggatatctcaccgattcaggattttacg
gggaatctggtgctggagttcattgattatagcttaggtgaacctaagtacaccgtcgat
gattccaaagagcgtgatgtcacttatgctgctccgctcagagttaaggttcgactcatc
aacaaggaaacaggagaagtcaaagagcaggaagtctttatgggagatttcccgatcatg
acggaaacaggaaccttcattattaacggtgcagaacgggttatcgtctcacagctggtt
cgttctcccagtgtctattataacacgaaagtggataaaaacggtaaaaaggcgtttacc
gctaccgtgattccgaaccgcggagcatggcttgaactggaaactgacgccaaagatatc
atttatgtccgtatcgaccgtacacgtaaaatcccggtaactgttcttctcagagcactc
gggtttggtacggatgcggagattcttgatcttcttggcgatgatgaatatattcgcaat
acccttgataaagacaatacggactcgacagataaggctctgatcgagatttatgaacgt
ttgcgtccaggcgagccgcctactttggataacgctcgaagcttgctctacgcccgtttc
tttgatccaaaacgctatgatttggcaaatgtgggccgttacaaaatcaacaaaaagctg
cacattaaaaaccgtttgtttaaccagcgcttggcggaaacgcttgtccatccggaaacg
ggtgagattattgcagaagccgggcagcttgttgaccgccgccttctggatgagattctt
ccctgcctggaagagggagtcggttttaaggaatacagcgttcctaatggtgtgttggaa
tcagatcatattccaatgcaaaccattgacgtattttcgccaattgaggacggcaaagta
gtgaaggtaatttccaatggtgtaattgataaaaatgtaaagaatattacccctgcggat
attatttcctccattaattattttataaatttacttcatggtattggaaacacagatgat
attgaccatctggggaaccgccgtctccgctctgtaggtgaattgctgcagaaccagttc
cgtatcggtctttccagaatggaacgtgtggttcgtgagagaatgtccattcaggatgcg
aatgtaattacgccgcaagctctgattaatatccgtccggtcattgcttcgataaaagag
ttcttcggcagctcccagctctcccagtttatggatcaaaccaatccgctcgccgaattg
acacacaaacggcgtctttctgctctgggaccgggtggtttgactcgtgaacgggcaggt
tttgaagttcgtgacgttcaccactctcactatggccgtatgtgtccgattgaaactcct
gaaggaccaaatatcgggttgattaactccttgtctacatttgcacggattaacgagtac
ggatttattgaggccccataccgtcgcgtggaccctaagacaggagtggttaccgatgag
attgtctatatgacggcagacgaagaagataattatgtcgtagcccaggcaaacgctgaa
ttgaatgaggatgggacttttgcggctgataatgtgtatgtccgttacaaagatgaaatt
ctcacattgcctaaagaacgtgttgactatatggacgtatcccctaaacaggttgtgtcc
gtcgcaacggccctgattccgttccttgaaaatgacgactccaaccgtgcgctgatggga
tccaacatgcagcgccaggccgttccgcttctgatgcctaaagctcctcttgtaggaaca
ggcatggaatataaagcggcaaaagactctggtgtatgtgtcgttgcaaagcatgacggg
attatagagaaggtttccggaaatgagatttggcttcgtcgccaggaagaggtcgacggc
agattagtttccggtaatattacgaaattcaagcttcataaatttatgcgttccaaccag
ggaacatgcattaaccagcgtccgcttgtgcttgaaggacagcgtgtcaaagcaggggat
attcttgcagacggaccatcgacggaacagggtgaactggcactgggaagaaacgtggtg
gtagctttcatgacctgggaaggttataactacgaggacgcgattctgctgagcgagaaa
cttgtgaaagaggatgtttacacttccattcacattgaggaatatgagtctgaagcccgg
gataccaaacttggtcctgaagaaataacgcgagacattcctaacgttggggaggacgct
ctgaagaatctggatgagcgtggaattatccgcgtaggagctgagattggcgcaggagac
attcttgtaggcaaggttacaccaaaaggagtaacagaactgactgcagaagaacgcttg
ctgcatgctatcttcggtgaaaaggcccgtgaagtccgtgacacttccctccgtgttcct
catggaacagacggaattgtggttgatgtcaaagtgtttacacgtgaaaacggcgatgag
ctgccaccaggtgtgaatcaactggttcgtgtttatatcgcccagaaacgtaagatttcc
caaggggataaaatggcaggacgccacggtaacaaaggggttatcgcaagaatcctgcct
gaagaagatatgccgttccttccagacgggactccggttgaggtcgtactaaacccgctg
ggcgtaccatcccggatgaatattggtcaggtacttgaagtccatttaggtatggctgcc
aaacaactggggattcatgtggcaacgccggtatttgacggtgcacatgaatacgatgtg
ttcgatacgatggaagaagcaggtatgcaacgaaacggtaaaacgaagttgtacgacggc
cggaccggtgaagaatttgaacgtgaagtaaccgtcggggttatgtacatgatcaaattg
gcacacatggtcgacgataaaatccatgcccgttccactggcccttactcgcttgttacc
caacagccgcttggtggtaaggcgcagtttggtggtcagcgattcggtgagatggaggtt
tgggctttagaagcctatggtgcggcgtatacgctccaggagattctgacagtcaaatcc
gatgacgtggtcggtcgtgtgaagacttacgaatccattgtcaaaggcgaaaacgtccca
gaaccaggtgttccagaatctttcaaagttttgatcaaagaacttcaaagtcttggtatg
gatgtgaagattctttccggtgatgaagaagagatcgaaatgaaagaattggacgatgaa
gatgatgccggcagtgataaactcaatctgaacctggaaggtgcagaaatgggggcagag
taa
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