Paenibacillus lautus: D5F53_00870
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Entry
D5F53_00870 CDS
T05701
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plw
Paenibacillus lautus
Pathway
plw03420
Nucleotide excision repair
plw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D5F53_00870 (pcrA)
03430 Mismatch repair
D5F53_00870 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plw03400
]
D5F53_00870 (pcrA)
Enzymes [BR:
plw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5F53_00870 (pcrA)
DNA repair and recombination proteins [BR:
plw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D5F53_00870 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
D5F53_00870 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
Viral_helicase1
ResIII
Glyco_hydro_64
DEAD
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
AYB41936
UniProt:
A0A385TE41
LinkDB
All DBs
Position
192439..194769
Genome browser
AA seq
776 aa
AA seq
DB search
MHSIDIHDAVRRLNPQQRQAVEATDGPLLIMAGAGSGKTRVLTHRIAYLIATRKAAPWSI
LAITFTNKAAREMQERVSKLVGREGQDIWVSTFHSMCVRILRKDIERIGFTSNFSILDST
DQLSVIRNVMKQHNIDPKKFEPKAIQAAMSAAKNELISPQQYEQKAGDYFETLVAKVYTE
YQKRLKSNNSLDFDDLIMTTIQLFKEVPEVLDFYQRKFQYIHVDEYQDTNRAQYMLCRML
ADSHHRICVVGDSDQSIYRWRGADITNILNFEQDYPEARTILLEQNYRSTANILNAANNV
IGLNTGRKPKNLWTEQGEGPKIKVFRGDTEHDEGYFVTSEISKNIKDGKSYQDHAILYRT
NAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDMLAYLRLISNPDDDISLTRIINVPKR
SIGDTTVAKLTAAAGERGISIFRVLEIVDDLGFAGRTRNALVGFYDMIAALSRMVEFLSV
TELTEKILEMSEYRLELQNENTIESRSRLENIDEFLSVTQEFEKNNEDKSLVSFLTDLAL
IADIDSMNDDEEDRDDAVVLMTMHSAKGLEFPVVFIIGMEEGVFPHSRAFMDNEELEEER
RLAYVGITRAEKQLFLSCARMRTLFGRTTANMPSRFLEEIPEELKEDTQMAHDRYRRGGG
SNVGGSYAGRGFGGGGGSNFGGGRSVDLSLSGSTASAQAAPKSRVTMTTGGSSRPAAASG
SGDFKAGDKVAHGKWGTGTIVAVKGSGNDMELQIAFPAPVGVKRLLAGFAPITKVE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcattccattgacatacacgacgccgtcagacgtctcaatccgcagcagcgccaagcc
gttgaagcaaccgacggaccgctgctcattatggccggagccggttccggcaagacgcgg
gtgctgacgcaccggatcgcttacctgatcgccacgcgcaaagccgcaccatggagcatc
ctggcgattacgtttacgaataaggcagcccgcgagatgcaggagcgggtatccaagctg
gtcggccgggaaggccaggacatttgggtatcgacgttccactccatgtgcgtacggatt
ttgcgcaaagacattgagcggatcggctttacttcgaattttagtattttggattcgaca
gaccagctgtccgtaattcggaacgtgatgaagcaacacaacatcgatccgaagaaattc
gagccgaaggcgatccaagcggccatgagcgcggccaagaatgagctgatctccccgcag
cagtatgaacagaaagccggggactattttgaaaccctcgttgccaaggtctacaccgaa
taccagaaacgcttgaagagcaacaattcgctcgatttcgacgatttgatcatgaccacg
atccagctgtttaaggaagtgccggaggttctagacttctaccagcgcaaattccagtac
atccacgtggatgaataccaggataccaaccgggcgcagtacatgctctgccgcatgctg
gcggacagccatcaccgcatctgcgttgtcggggacagcgaccagtcgatctaccgctgg
cgcggcgcggatatcacgaacatcctgaattttgagcaggattacccggaggcgcgcacg
attctgctggagcagaattaccgttcgacagcgaacattttgaacgctgccaacaatgtt
attggcctgaacacgggccgcaagccgaagaatctgtggaccgagcagggcgaagggccg
aagatcaaagtgttccgtggggatacggagcatgatgaggggtattttgtcacctcggaa
attagcaagaacatcaaggacggcaagagctaccaggaccacgcgattctgtatcggacc
aacgcgcagtcccgggtgatcgaggaaattttgatcaagtcggatattccgtaccagatc
gtcggcggcatcaagttctacgatcgcaaagagatcaaggacatgcttgcttatctgcgc
ctgatttccaacccggacgacgatatcagcttgacgcggatcattaacgtgccaaaaaga
agcatcggcgacacaaccgtcgcgaagctgactgcagcagccggagaacggggcatctcg
atcttccgcgtgctagaaatcgtggacgacctcggttttgccggacggacgcgcaatgcg
ctggtgggcttctacgacatgattgccgcgctcagccgaatggtcgagtttctgtcggtg
accgagcttacggaaaaaattctcgagatgtccgagtaccgcctcgagctgcaaaacgag
aatacgatcgaatccagatcccgcctcgagaacatcgacgagttcctgtcggttacgcaa
gagttcgagaagaacaacgaggataagtcgctcgtctccttcctcacggatcttgcgctg
atcgcggacattgactcgatgaacgatgacgaggaagaccgtgacgatgctgtcgtgctc
atgaccatgcacagcgccaaaggcctggagttcccggtggtattcatcatcggcatggag
gaaggagtattcccgcacagccgtgcctttatggataacgaggagctggaagaagaacgc
cgacttgcttatgtaggcatcacgcgcgccgagaagcagttgttcttatcctgtgcgcgc
atgcgtacgctcttcggccgcacaacggcgaacatgccatcgcgattcctggaggagatc
ccggaagaactgaaggaagacacccagatggcgcatgaccgctaccgccgaggcggcgga
agcaatgtgggcggatcctatgcgggacgcggcttcggcggcggtggaggcagcaacttt
ggcggcggccgcagcgtagacctctccctcagcggatcgacggcttccgcgcaagccgcg
ccgaagagccgggtgacgatgacaaccggtgggtcatcccgtccggcggctgcctcgggc
agcggcgattttaaggccggcgacaaagtcgcccatggcaaatgggggaccggtacgatc
gtagcggtgaagggcagcggcaatgacatggaattgcagattgcattcccggcgcctgta
ggcgtgaaacgcctgcttgccggctttgcgccgattacgaaggtggaataa
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