KEGG   Paenibacillus lautus: D5F53_03400
Entry
D5F53_03400       CDS       T05701                                 
Name
(GenBank) DNA polymerase domain-containing protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
plw  Paenibacillus lautus
Pathway
plw03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:plw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    D5F53_03400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plw03400]
    D5F53_03400
Enzymes [BR:plw01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     D5F53_03400
DNA repair and recombination proteins [BR:plw03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     D5F53_03400
SSDB
Motif
Pfam: LigD_Prim-Pol
Other DBs
NCBI-ProteinID: AYB42383
UniProt: A0A385TFJ4
LinkDB
Position
complement(691564..692481)
AA seq 305 aa
MARTVKGTLTIEGQEIQITNPDKPLWPEVGITKAMYLQKLAAISPFLLRYCRGRLLTTIR
YPHGAEGESFYQKNAPEPLPPFVQTYVHENINYVLLNGLPELLWLGNLAALEFHPSLHLA
GSHLPCEWMIDLDPTLPEEPRIMEATAIVGDVLSSLGLSSVPKTSGATGVQIIVPIPEGI
TFDELRTVGQFVGQYVTEKFPRLFTIERLKKNRGDKIYFDYLQHYSGRTLAAPYTPRARR
LGTVSTPLTWDEVRQDVSPTEFHLLNIEERLREKGDLLQTLPPQPIENVIRHLKPKGKTE
SKRKG
NT seq 918 nt   +upstreamnt  +downstreamnt
atggctcgtaccgttaaaggcaccctgacaatcgaggggcaagagattcaaattacgaat
cccgacaaaccgctgtggccggaggtcggcattaccaaggcaatgtatttgcaaaagctt
gcggccatctccccgttcttgctccggtactgccggggcaggctgctcacaaccatccgg
tatccgcacggagccgaaggcgaatccttctatcagaaaaacgcgccggagccgctgccg
ccttttgttcagacctatgtgcacgaaaatattaactatgtgctgctcaacgggctgccg
gagctgctctggctgggaaatctggctgcgcttgagtttcacccttccctgcatctggca
ggcagccatctgccctgcgaatggatgatcgatttggatcccacgctcccggaggagcca
cggattatggaggcgacggccatcgtaggggacgtgctgagctccctgggcctgtcctcc
gtcccgaaaacctcgggagcgaccggggtacagatcatcgttccgattccggaaggcata
acgttcgatgaacttcgaacggtcggccaattcgtgggccaatacgtgacggagaagttc
ccgaggctgttcaccatcgagcggctgaagaagaaccgcggcgataaaatctacttcgat
tatcttcagcactacagcgggaggacgctcgccgctccttataccccgcgggcccgacgg
cttgggaccgtctccacgccgctcacctgggacgaagtccgccaggacgtttctcccacg
gagtttcacctgctgaacatcgaagaacggctgagggagaagggcgacctgctgcagacc
ctgccgccccaaccgatcgagaatgtcattcggcatctgaagccaaaggggaagactgag
tcaaaaaggaaaggatag

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