Paenibacillus lautus: D5F53_03885
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Entry
D5F53_03885 CDS
T05701
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
plw
Paenibacillus lautus
Pathway
plw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
D5F53_03885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plw03400
]
D5F53_03885
Enzymes [BR:
plw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
D5F53_03885
DNA repair and recombination proteins [BR:
plw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
D5F53_03885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AYB42467
UniProt:
A0A2A5LEV2
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All DBs
Position
774846..775967
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AA seq
373 aa
AA seq
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MLKIGSHVSFSDKGLLTATAEATSYGSSSFMIYTGAPQNTRRKPIDSMFIEEGKAAMKES
GIEEIVVHAPYIINLGSYKPNTFELAVSFLQEEIRRTHAVGVKNIVLHPGAYTDKDAEYG
IDRIAEGLNEVLGGTDETEVKIALETMAGKGTEMGRSFEEIASIIDKVKYNDRLAICLDT
CHIHDAGYDIVNDLDGVLEQFDKLIGLDRLTVVHVNDSKNPRGAGKDRHTPIGTGWIGYE
AIQRVVHHEKLQGRPFILETPWIGKDPKTQRPMYEIEIALLRGDVEGRFGQAFTQQVEEL
GAFFAKEGIESRSFVLDTWTLLKNDAKAKKADPREPMERLYDMVMAAGLLSDLSEEQINQ
RLIAWLSGVSLTS
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaattggttcccacgtgtcgttttcggacaagggattgctgactgcgacggct
gaagccacgtcttacggctcaagctcgttcatgatatataccggcgcgccgcaaaatacg
cgacgcaagccgatcgactccatgtttatcgaagaaggcaaagccgccatgaaggaaagc
gggattgaagaaatcgtggtccacgcgccgtacattatcaacctcggatcgtacaagccg
aatacgtttgagctggcggtgagcttcctgcaggaggagatacgccgcacgcatgcggtc
ggcgtgaagaacatcgttctccatcccggcgcatataccgacaaggatgcggaatacggc
atcgaccgaattgcggaaggtcttaatgaagtgctgggcggtacggatgagaccgaagtg
aagattgcgcttgagacgatggccggcaaaggtactgaaatgggacgcagctttgaagaa
attgcttccattattgataaggtgaagtacaacgaccgattagccatttgcctggacacc
tgccatattcatgacgcgggatatgatatcgtgaatgatctggacggcgtgctggagcag
ttcgacaagctgatcggactcgaccgtttaacggtcgtccacgtgaacgatagcaagaac
ccgcgcggagcgggcaaagaccgtcatacgccgattggaaccggatggatcgggtatgaa
gccattcagagagtggttcatcacgaaaaactccagggcagaccgttcattctcgaaacg
ccgtggatcggtaaagatccaaaaacccagcgtccgatgtacgagatcgagattgcgctt
ctgcgcggggatgtggaaggccgtttcggccaagctttcacgcagcaagtggaagagctg
ggtgctttctttgccaaggaaggcatcgagtcccgttcatttgtactggatacctggacg
ctgctgaagaatgatgccaaagccaaaaaggccgatccgcgcgaaccgatggagcgcctg
tacgatatggtcatggcggccggcctgctgtccgacctgtcggaggagcagatcaatcag
cgcctgatcgcttggttgtcgggtgtttccctgacatcctaa
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