Paenibacillus lautus: D5F53_05225
Help
Entry
D5F53_05225 CDS
T05701
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plw
Paenibacillus lautus
Pathway
plw03030
DNA replication
plw03430
Mismatch repair
plw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D5F53_05225
03430 Mismatch repair
D5F53_05225
03440 Homologous recombination
D5F53_05225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plw03032
]
D5F53_05225
03400 DNA repair and recombination proteins [BR:
plw03400
]
D5F53_05225
Enzymes [BR:
plw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D5F53_05225
DNA replication proteins [BR:
plw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D5F53_05225
DNA repair and recombination proteins [BR:
plw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D5F53_05225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF6282
Motif
Other DBs
NCBI-ProteinID:
AYB42724
UniProt:
A0A385TJA6
LinkDB
All DBs
Position
1064885..1068610
Genome browser
AA seq
1241 aa
AA seq
DB search
MSSFVHLHVHSEYSLLDGAARIGDLVREAAALGMKSLALTDHGVMYGAVPFYKACLAQGI
KPIIGCEAYITAGSRKERGSRKDQPIYHLILLAKNETGYRNLMKLCSIGHLEGYHYRPRI
DMEALAAHHEGIICLSACLGGEVPQHLLHGREAEAKAAALRYQAIFGEDYYLELQDHGIP
EQKRVNPQLIQLSRETGIPLVATNDVHYLTESDAEVQDVLICIGTGKTVEDEDRLQIQTN
QLYLKSGSDMERLYPHVPEAILNTAKIADQCNLELEFGKSILPEYSSLPEGKNAAEYLRD
LCLNGLRERYEGTERWQDEGQRSELEQRLDYELGVIENMGFSDYFLIVWDFIAYAHRKGI
AVGPGRGSSAGSLVAYTLQITNVDPMKYKLLFERFLNPERITMPDIDIDFSDERRDEVID
YVVDKYGKEHVAQIITFGTMAARAAVRDVGRALNVPFGDVDKAAKLIPNHLGISIERAME
QSPQLKEQYETKPKVRELIDMAMKVEGMPRHASTHAAGIVISREPLTDAVPLQEGSEKTA
LTQYSMENLESVGLLKMDFLGLRTLSIIERTLKWIQELTGRELDFEQVPDDDQATYEMLG
RGETTGVFQLESAGIRRVLKDLKPSVFEDIVSVNALYRPGPMEFIPKFIQAKHGRIEPEY
PHPDLIPILGDTYGIIVYQEQIMQIASAMAGFSLGEADLLRRAVSKKKREVLDRERSHFV
SGSLKLGYTEDEANRVYDMIVRFANYGFPRAHAAAYGVLAFQTAYLKAHYPVPFMASMLT
AVMGSHRKVAEYVLEARRIDIEVMPPDVNESGTYFTPVMSRSAAEGSDRQADSPARGGIR
FGLAAIKNVGTQAVENIVEIRREKPFESLLDFCRRVDLRVCNKRVIESLIQAGAFDSLQG
HRSQLVAMLDETVEAAVKWRKERDDLQIQLFDFVETANWDIEYPDIPPYTASQQLEFERE
LLGMYLSGHPLDGFEETLTESGADRLMDLHEAEDESMATVAGMVVTLKTITTKQGKAMAF
MECEDQIERCEVVLFPEVWKRSAHLIEKGALLAIRAKVQLQDEGFKLLAEEIAPLEAQTL
GQLVRRSKVRGTPGGRGRTEGAGRGAVSGATGKQAASAGERKAVPNAAQPLAATKGQDLP
SSEKVVSGMNRTSEKESRAGASNPKAEQRVFVKITADAERSEMLVKLKELLQRHPGPVAT
VLFYEQSQKVLALSDAYRIEPSQELLAEMESMLGKDTVKVK
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgagctctttcgtgcatttgcacgtgcatagtgaatacagtttgctcgatggagcggca
cgtatcggtgacctggtgcgggaagcggcggcgcttggcatgaaatcgctggcgctgacg
gatcatggcgtgatgtatggtgccgttccgttctataaagcctgcctggcgcaaggcatc
aaaccgattatcggctgcgaggcctatatcacggcaggctcccgcaaggagcggggaagc
cgcaaggatcagccgatctatcatctgattctgctagccaagaatgagaccggctatcgc
aatttgatgaagctgtgctcgatcgggcatctggaggggtatcattacagacctcgaatc
gatatggaggcgctggccgcccatcatgaaggcatcatatgcctcagcgcctgcttggga
ggcgaggttccccagcatctgcttcatggacgcgaggcggaagccaaggcggctgcgctc
cgttaccaggcgatttttggagaggattactacctggagctgcaggatcacggaattccg
gagcagaagcgcgtgaatccccagctgattcagctgagccgcgagaccggcattccgctg
gtagcgaccaacgatgtgcattatctgaccgagagcgatgccgaggttcaggacgtcctg
atctgcatcggcacgggaaagacggtcgaagatgaagacaggctgcagatccagacgaat
cagctttatttgaagagcggcagcgacatggagcgattgtatccccatgtgcctgaagct
atattgaatacggctaagattgcggaccaatgcaacctggagctggaattcggcaagtcg
attttgccggaatacagctcgctcccggaagggaagaatgctgcggaatatctgcgggat
ctctgcctgaacggattgcgggaacgttacgaaggtacggagcggtggcaggatgaaggg
cagcgcagcgagctggagcagcgcctcgattatgagcttggcgttatcgagaacatgggc
ttcagcgattatttcctgatcgtatgggactttatcgcctatgcccaccggaaaggcatc
gccgtcggacccggaaggggttcctcggcaggaagcctggtggcttacaccctgcagatt
accaatgtggacccgatgaaatataagctgttgtttgaacgcttcctgaatccggaacgg
attacgatgccagatatcgatatcgatttcagcgatgaacgccgggacgaggtcatcgat
tacgtggtggacaaatacgggaaagagcatgtggcccagatcatcacgttcggtacgatg
gccgcgagggcagccgtccgcgacgtcgggcgtgcgctgaatgtgccgttcggggatgtg
gacaaggcggccaagctgatccctaaccacctgggcatcagcatcgaaagagcgatggag
caaagcccgcagttgaaggagcagtacgagacgaagccgaaggtgcgcgagctgatcgat
atggcgatgaaggtcgagggcatgccgcgccatgcatcgacgcatgcggccggcatcgtc
atttccagggagcccttgacggatgcggtgccgctgcaggaaggcagcgagaagacggcg
ctgacgcagtactccatggagaatttggagagcgttgggctcctgaagatggattttttg
ggcctgcggacgctatcgatcatcgagcgcacgctgaaatggattcaagaattgacgggc
agagagcttgatttcgaacaagtgccggatgacgaccaagcgacttacgaaatgctgggc
cgaggggagaccacgggcgtatttcagctcgaatccgcaggaatacggcgggtgctgaag
gatttgaaaccttcggtgtttgaggatatcgtatcggtgaatgccctgtaccgcccgggt
cccatggagtttattccgaaattcatccaggccaagcacggccggatcgagccggagtat
ccccatccggacctgatcccgatactgggcgatacgtacggcattatcgtttaccaggag
cagattatgcagatcgcttcggcgatggcgggcttctcgctcggggaagcggatctgctg
cgcagagcggtatcgaagaagaaacgcgaagtgctggaccgcgagcgcagccacttcgtt
tcagggagcctgaagctgggctataccgaggatgaggccaaccgcgtgtacgacatgatc
gtccggttcgcgaactacggattcccgcgcgcgcatgctgccgcatacggcgtgctggcc
ttccagacggcttatctcaaggcgcactatccggttccgttcatggcttccatgctgaca
gccgtcatgggcagccatcggaaggtagccgaatacgtgctggaggcgcggcgcatcgat
atcgaggtcatgccgccggacgtcaacgaaagcgggacgtattttacgccggtcatgagc
cgttctgctgccgagggcagcgataggcaggccgattcaccggctcgcggcgggatccga
ttcgggcttgccgccatcaagaacgtcggcacgcaagcggtggagaatatcgtcgagatc
cggcgcgaaaagccgtttgaaagcctgcttgatttctgccgccgcgtcgacctccgcgta
tgtaacaagcgcgtgatcgagtccctgatccaggccggggccttcgattccttgcagggg
caccgctcccagctggtcgccatgctggacgaaacggtggaagcggccgtgaagtggaga
aaggagcgggatgatcttcagattcagctcttcgacttcgtggaaaccgcgaattgggac
attgaatatccggacatcccgccttataccgcaagtcagcagctcgaattcgaacgcgag
ctgctgggcatgtatctgtccggtcatccgctggacggctttgaagagacgctgacggag
tccggagcggatcggctcatggatctgcatgaagcggaggatgagtcgatggctacggtt
gccggcatggtcgtcacgctgaagaccattacgacgaaacaggggaaagcgatggccttc
atggagtgcgaggatcaaatcgagcgctgcgaggtcgttctctttccggaagtgtggaag
cgcagcgcgcacctgattgaaaaaggcgccctgctcgcgatccgggcgaaggtccagctg
caggacgaaggcttcaagctgctggctgaagaaatcgctccgcttgaagcgcagaccttg
ggccagctggttcgccgaagcaaggtccggggaacgccgggcggcagaggcaggaccgag
ggagcaggccggggtgccgtgtcgggcgcaaccggcaagcaggcggcttcggccggcgaa
cgaaaggccgttccgaatgcagcgcagccgcttgccgccacgaaaggccaagacctgcct
tcgagcgaaaaggtcgtttcgggcatgaaccgaacgtccgagaaggaatctcgagcaggc
gcatcgaatcctaaagcagagcagcgcgtgttcgtgaaaataacggccgatgcggagcga
tcggagatgctggtcaagctgaaagagcttcttcagcggcatcccgggcctgtagcaacg
gtgttgttttatgagcaaagccagaaggtgcttgcgctcagcgatgcctatcggatcgaa
ccttcgcaagagctccttgccgaaatggagagcatgctgggcaaagacaccgttaaagtg
aagtga
DBGET
integrated database retrieval system
