Paenibacillus lautus: D5F53_05350
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Entry
D5F53_05350 CDS
T05701
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
plw
Paenibacillus lautus
Pathway
plw03030
DNA replication
plw03410
Base excision repair
plw03420
Nucleotide excision repair
plw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D5F53_05350 (polA)
03410 Base excision repair
D5F53_05350 (polA)
03420 Nucleotide excision repair
D5F53_05350 (polA)
03440 Homologous recombination
D5F53_05350 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plw03032
]
D5F53_05350 (polA)
03400 DNA repair and recombination proteins [BR:
plw03400
]
D5F53_05350 (polA)
Enzymes [BR:
plw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D5F53_05350 (polA)
DNA replication proteins [BR:
plw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D5F53_05350 (polA)
DNA repair and recombination proteins [BR:
plw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
D5F53_05350 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D5F53_05350 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
DUF61
Motif
Other DBs
NCBI-ProteinID:
AYB42749
UniProt:
A0A385TGF6
LinkDB
All DBs
Position
1093206..1095866
Genome browser
AA seq
886 aa
AA seq
DB search
MDKLILIDGNNIIYRAFFAMPPLTNASGQQTNAVYGFTTMLLRLIEEHKPTHMMVAFDAG
KETFRHADFQEYKGGRQKTPPELSGQFPLLKELLKGLGVSQFEIGGYEADDIIGTITRQA
DEAGRKVMVVSGDKDMLQLASEHTTIAMVRKGVTEIEYYGPEQIKERYNLTPDQIIDLKG
LMGDASDNIPGVPGVGEKTALKLLHEFGSVEAVVSRTDELKGKMKEKIEEHADSAILSKK
LATIFREVPLEQSLDEMAFTGLNEETAGPALAKLEFKSLIERLNLSTSGAAGDAAESKPQ
AKIDVTLVDATGIAEVADHLAQVTVLHVETHGDNPHHADVIGLALATEERQYFIPFDVLK
SEEAEPVRAWLADSEIPKRGYDLHRIDLALHWQDIAFAGAAFDVHLAAYLLDPTESNQTL
SGLASKYGLAYLQADEDVFGKGAKYKVPEVEKLSEHMARKCLAVSELVPVQEKELAANGM
LPLFHDLEMPLSRILADMEKQGIAVNAEDLKELGREFEGQIEKLVQEIYEIAGTEFNLNS
PKQLGEILFVKLELPVIKKTKTGYSTDAEVLEKLAPYHDIVRLILQYRTLAKLQSTYVEG
LLKEISSVTGKVHTYYRQTIAATGRLSSQYPNLQNIPIRLEEGRKLRKVFVPSEPGWSIL
AADYSQIELRVLAHISDDERLKEAFVHDMDIHTKTAMDVFGVGMDEVDSNMRRSAKAVNF
GIVYGISDYGLSQNLNITRKEAAAFIDQYFEVFQGVRRYMDVIVKQAKQDGYVKTLLERR
RYLPEINASNFNLRSFAERTAMNTPIQGTAADIIKLAMVQMDKALHERQLKSRMLLQVHD
ELVFEVPEDELEVMKELVPDVMSQALKLSVPLKSEVSYGENWYEAK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctgattctgattgatggaaataatatcatttaccgggcattctttgcgatg
ccgccgctgaccaatgccagcggacaacagacgaacgcggtttacggctttacgacgatg
ctgcttcgcttgatcgaggagcataaaccgacgcacatgatggtggctttcgatgccggc
aaggaaacgttccggcatgcggattttcaggagtacaagggtggccgacagaagacgccg
ccggagctctcaggacaattcccgctgctgaaagagctgctgaaaggcctgggcgtctcc
caattcgaaatcggcggttatgaggccgacgacattatcggtacgattacccgccaggct
gacgaagccggccgcaaggtgatggtcgtctccggggacaaggacatgctgcagctggct
tcggagcataccacgatcgcgatggtccgcaaaggcgtcaccgaaatcgagtattacgga
ccggaacagattaaggagcggtataacctgacgcctgatcagatcatcgaccttaaggga
ttgatgggcgatgcttccgataacattcccggcgttccgggagtaggggagaagaccgcg
ctgaagctgcttcatgaattcggatccgttgaggcggtggtgtcccggaccgatgagctg
aagggcaagatgaaagagaaaatcgaggagcatgcggattccgccatactcagcaagaag
ctggctacgattttccgggaagtaccgctggaacagtcgctggatgaaatggcatttacg
ggcctgaatgaagagacggctggtcccgcactggcgaagcttgagtttaaatcgcttatt
gaacggttgaacctgagcacaagcggtgccgctggtgatgcggcggagtcgaagcctcaa
gcgaagatcgacgtgacccttgtggacgcgacgggaattgccgaggttgcggaccatttg
gcacaagtgaccgtgctccatgtagaaacgcatggggataacccccatcatgcggacgtg
atcggtctggcgctcgcaacggaggagcggcagtacttcatcccgtttgacgtgctgaag
tcggaagaggcggagccagtccgtgcttggcttgccgatagcgagatcccaaaacgcggg
tatgacctgcaccgtattgacctggcacttcattggcaggacatcgcttttgccggcgcg
gcattcgacgttcacctggcagcctacctgctggacccgacggagtcgaaccaaaccctt
agcgggctggcctcgaagtacggactggcctatcttcaagccgatgaggacgtgtttggt
aaaggggccaagtacaaggtcccagaagtggaaaagctcagcgagcatatggccagaaaa
tgcctggccgtatccgaactggttcccgttcaggagaaggagctggctgcgaatggaatg
ctgccgctgttccatgatctggagatgccgctttcccgcattctggccgatatggagaag
cagggaattgccgtgaatgcagaggatttgaaggagctgggacgcgagttcgaagggcaa
atcgagaagctcgttcaggagatttatgagatcgccggaacggaattcaatctcaattcg
cctaaacagctcggcgaaatcctgtttgtgaagctggagctgccggtcattaagaagacc
aaaaccggttattccaccgatgccgaggtgctcgaaaagctggcgccatatcacgatatc
gtgcgcctgattttgcagtaccgtactttggccaagctgcaatccacctatgtggaaggg
ctgctgaaggagatttcatccgtaaccggcaaagtgcatacctactatcgtcagacgatt
gccgctacgggacgtctgagcagccaatatccgaatttgcagaacattccgatccgtctg
gaggaagggcgcaagctgcgcaaggttttcgttccgtcggaaccgggctggagcattttg
gcggcggactactcccaaatcgagcttcgcgtgcttgcgcatatctcggacgacgaacgg
ctgaaggaagccttcgtccacgacatggacatccacaccaagacggcgatggacgtgttt
ggagtcggcatggatgaggtggactccaatatgcgccggtccgccaaggcggttaacttc
ggcatcgtgtatggaatcagcgactatgggctgtcccagaacctgaacattacgcggaag
gaagcggcagcatttatcgaccagtatttcgaggtgttccagggcgtgcgtcgctatatg
gacgtgatcgtcaagcaggcgaagcaggacgggtatgtgaagaccttgctcgaacgcaga
cggtatctgccggagattaacgccagcaacttcaacctgcgctcttttgcggagcggacg
gcgatgaatacgccgattcagggaacggctgccgacatcatcaagctggccatggtccaa
atggacaaggcgctccatgagcgccaattgaagagccgcatgctgctccaggtgcacgat
gaattggtgttcgaggtaccggaggatgagctggaggtcatgaaggaattggtgccggac
gtgatgagccaggcgctgaagctgtccgtgccgctgaaatcggaagtcagctatggggag
aactggtacgaggcgaagtaa
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