KEGG   Paenibacillus lautus: D5F53_06330
Entry
D5F53_06330       CDS       T05701                                 
Name
(GenBank) HD domain-containing protein
  KO
K03698  3'-5' exoribonuclease [EC:3.1.-.-]
Organism
plw  Paenibacillus lautus
Brite
KEGG Orthology (KO) [BR:plw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plw03019]
    D5F53_06330
Messenger RNA biogenesis [BR:plw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     D5F53_06330
SSDB
Motif
Pfam: HD tRNA_anti-codon FBPase_2
Other DBs
NCBI-ProteinID: AYB42920
UniProt: A0A385TEA0
LinkDB
Position
1336850..1337806
AA seq 318 aa
MKPINKLSIQDDFVGFYLLKELNMRQTNGTPPKDYFDIILADASGQISAKYWDVTIQDKE
TFLPMQLVKIQGTVLSYRDQPQVKISRIRKATDADGVSLTDFVRAAPIRPVDLLHTIKLT
MNEITEPQVRSIVEYCVSKVEEKLMHYPAAKTYHHAYYAGLAYHIVRMLEIGDFICKQRP
FLNPDLIRAGIILHDIAKPEEMIAQMGIVTDYSNQGKLIGHIALASNWIVEAAIENGIAL
ESEVVLGLQHLVLSHHNLGEWGSPVQPQTAEAVALHHIDLLDAKLQMVEDALDTTLETEP
WTPMIRGLDNKAIYRLKV
NT seq 957 nt   +upstreamnt  +downstreamnt
atgaaacctattaataaactcagcatacaagacgattttgtcggtttttatttgttaaaa
gaattgaatatgagacagaccaacggcacgccgccgaaagactatttcgatattattctc
gcggatgccagcggtcaaatatcagccaagtactgggatgtgaccatacaggataaagaa
acgttcctgccgatgcaattggtcaaaatccaggggaccgtactgagctacagggaccag
cctcaagtcaagatcagccgtatccgcaaggccaccgatgcggatggcgtttcgttaacg
gattttgtgagggctgcgcccattcgccccgtggatttgttacatacgatcaaacttacg
atgaacgagattacggagccgcaggtgcgaagcatcgtggagtattgcgtgtcgaaggtg
gaagagaagctgatgcattatccggctgccaaaacctatcatcatgcctattacgccggg
ctggcctaccatatcgtccgcatgctggagattggcgactttatctgcaagcagcggccg
tttctgaatccggatttgatcagggcgggcattatcctgcatgatatcgcgaagccggaa
gagatgatcgcacagatgggcatcgtaacggattacagcaaccagggcaagctgattggg
catatcgccttggcgtctaactggatcgtggaggcggcgatcgagaacggcatcgcgctt
gaatccgaagtggttttgggcttgcagcatctggtgctttcccatcataacctgggagag
tggggcagcccggttcagccgcaaacggccgaggccgtcgcgctgcatcatatcgatctg
ctggatgccaagctgcagatggtagaggacgccctggatacgacgcttgaaacggagcca
tggacaccaatgatccgcggcctggataataaagcgatttatcggttaaaggtatga

DBGET integrated database retrieval system