Paenibacillus lautus: D5F53_06330
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Entry
D5F53_06330 CDS
T05701
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
plw
Paenibacillus lautus
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plw03019
]
D5F53_06330
Messenger RNA biogenesis [BR:
plw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
D5F53_06330
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
AYB42920
UniProt:
A0A385TEA0
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All DBs
Position
1336850..1337806
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AA seq
318 aa
AA seq
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MKPINKLSIQDDFVGFYLLKELNMRQTNGTPPKDYFDIILADASGQISAKYWDVTIQDKE
TFLPMQLVKIQGTVLSYRDQPQVKISRIRKATDADGVSLTDFVRAAPIRPVDLLHTIKLT
MNEITEPQVRSIVEYCVSKVEEKLMHYPAAKTYHHAYYAGLAYHIVRMLEIGDFICKQRP
FLNPDLIRAGIILHDIAKPEEMIAQMGIVTDYSNQGKLIGHIALASNWIVEAAIENGIAL
ESEVVLGLQHLVLSHHNLGEWGSPVQPQTAEAVALHHIDLLDAKLQMVEDALDTTLETEP
WTPMIRGLDNKAIYRLKV
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctattaataaactcagcatacaagacgattttgtcggtttttatttgttaaaa
gaattgaatatgagacagaccaacggcacgccgccgaaagactatttcgatattattctc
gcggatgccagcggtcaaatatcagccaagtactgggatgtgaccatacaggataaagaa
acgttcctgccgatgcaattggtcaaaatccaggggaccgtactgagctacagggaccag
cctcaagtcaagatcagccgtatccgcaaggccaccgatgcggatggcgtttcgttaacg
gattttgtgagggctgcgcccattcgccccgtggatttgttacatacgatcaaacttacg
atgaacgagattacggagccgcaggtgcgaagcatcgtggagtattgcgtgtcgaaggtg
gaagagaagctgatgcattatccggctgccaaaacctatcatcatgcctattacgccggg
ctggcctaccatatcgtccgcatgctggagattggcgactttatctgcaagcagcggccg
tttctgaatccggatttgatcagggcgggcattatcctgcatgatatcgcgaagccggaa
gagatgatcgcacagatgggcatcgtaacggattacagcaaccagggcaagctgattggg
catatcgccttggcgtctaactggatcgtggaggcggcgatcgagaacggcatcgcgctt
gaatccgaagtggttttgggcttgcagcatctggtgctttcccatcataacctgggagag
tggggcagcccggttcagccgcaaacggccgaggccgtcgcgctgcatcatatcgatctg
ctggatgccaagctgcagatggtagaggacgccctggatacgacgcttgaaacggagcca
tggacaccaatgatccgcggcctggataataaagcgatttatcggttaaaggtatga
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