Paenibacillus lautus: D5F53_09260
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Entry
D5F53_09260 CDS
T05701
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
plw
Paenibacillus lautus
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plw03032
]
D5F53_09260 (topA)
03400 DNA repair and recombination proteins [BR:
plw03400
]
D5F53_09260 (topA)
Enzymes [BR:
plw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D5F53_09260 (topA)
DNA replication proteins [BR:
plw03032
]
Prokaryotic type
DNA Topoisomerases
D5F53_09260 (topA)
DNA repair and recombination proteins [BR:
plw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D5F53_09260 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Toprim_3
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AYB43460
UniProt:
A0A385TFW6
LinkDB
All DBs
Position
1962176..1964275
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AA seq
699 aa
AA seq
DB search
MADSLVIVESPAKAKTIGKYLGSKYIVKASMGHVRDLPKSQIGVEVENDFNPKYITIRGK
GSVLKELKDASKKVKKVYLAADPDREGEAIAWHLAHALELDDTQSLRVVFNEITKTAVKD
AFKTPRKINMDLVNAQQARRILDRLVGYKISPILWKKVKKGLSAGRVQSVAVKIILDREN
EISAFVPEEYWTITAKLAIKGSAFEAKFTQLNGAKKELANEQEVNEILEAIRDASFQVGE
VKERERQRHPSPPFTTSSLQQEAARKLGFRAAKTMSVAQQLYEGVELGKEGTVGLITYMR
TDSTRISGTAQEEAKEYITEKYGDPFVPESPRQYSKKAANAQDAHEAIRPTSVLRDPESM
KPFMSRDQLRLYKLIWERFVASQMSSAVLDTLSVDITAGNTVFRATGSKVRFPGFMKVYV
EGNDDGTTEEDKYLPELHSGDILEKQDIEPKQHFTQPPPRYTEARLVRTLEELGIGRPST
YAPTLETIQKRGYVAIEEKKFMPTELGELVIEQMEQFFPEILNVEFTANMEEDLDHVEEG
SEDWVKVLAEFYESFEKRLEVAEEEMKEIEIEDEVSDEICEKCGKPLVYKLGRFGKFLAC
SGFPDCRNTKPIVKDIGVSCPKCKEGHVVERRSKKGRVFFGCDRYPECDFVSWDKPSTKP
CPNCSSLMVEKKSKQGIKLQCTSCDYSEMVEEQDEAADL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
gtggcggattcactcgtcatcgtagagtcgcctgccaaggcgaaaacgattggcaaatat
ctcggcagcaagtatatcgtgaaggcttcgatgggtcatgttcgcgatttgccgaagagc
cagatcggggttgaggtggaaaacgacttcaatccgaaatacattacgatccgcggaaaa
ggttctgtcttaaaggaacttaaggatgctagcaaaaaggtgaaaaaagtgtacctcgca
gctgaccccgatcgagaaggggaagccattgcatggcatcttgcgcatgcgctggagctg
gatgatactcaaagcctgcgggttgtatttaatgaaataacgaaaacggccgtgaaggat
gccttcaaaaccccgcgcaaaattaacatggatctggttaatgcgcagcaggccagacgt
attttggaccgattggttggttataagatcagtcctattctatggaagaaagtgaagaag
ggtctttcggccggccgggttcaatcggtagccgtcaaaatcattctcgaccgcgagaat
gagataagcgctttcgttccggaagaatattggaccataacggccaagctggcgattaaa
ggctccgcattcgaagccaaattcacgcagctgaacggcgcgaagaaggaactggccaat
gagcaggaagtgaatgaaattctcgaggcgattcgggatgcttccttccaggtcggcgaa
gtgaaagagcgtgagcgtcagcgccatccgtcgccgccgtttacgacgagttccttgcag
caggaggctgcgcgtaaactcggtttccgggccgccaagaccatgtcggttgcccagcag
ctgtacgagggtgttgagttaggcaaggaaggcaccgtgggtttaattacttacatgcgt
acggattccacgcggatctcgggtacggctcaagaagaagcgaaggaatacatcaccgag
aagtacggtgatccgttcgtgccggagagcccgagacaatattcgaaaaaagcagccaac
gcccaggatgcgcatgaagcgattcgtcctacgtccgtgctgcgtgatccggaatccatg
aagccgtttatgagccgcgaccagcttcggttgtacaaactgatctgggaacgctttgtg
gcaagccagatgtcttctgcagtactggatacgctttcggtggacatcaccgcgggaaat
acggtcttccgggcgaccggttcgaaggtccgattccctggattcatgaaggtctacgtt
gaaggcaatgacgacggaacgacagaggaagacaaatacctgccggagcttcattccgga
gacattctggagaagcaggacatcgagccgaagcagcacttcacgcagccgcctccgcgt
tatacggaagcgcggcttgtccgaacgctggaggagctcggcatagggcgtccaagtacg
tatgcgccgacgctggagacgatccagaagagaggctacgttgccatcgaagagaaaaaa
ttcatgccgaccgagctcggcgagcttgtcatcgagcagatggagcagttcttcccggaa
atcctcaatgtggagtttacggcgaacatggaagaggatctcgaccacgtggaggaaggc
tccgaggactgggtcaaggtattggcagagttctatgaatcctttgagaagcggcttgaa
gtagcagaggaagaaatgaaggaaatcgaaatcgaagacgaggtttccgatgagatctgc
gaaaaatgcggcaagcccctggtgtataagctgggccgtttcggcaagtttcttgcctgc
tcgggctttccggattgccggaataccaagccgatcgtgaaggacatcggcgtttcttgc
ccgaaatgcaaggaaggccatgtcgtagaacgtaggagcaagaaggggcgcgtcttcttt
ggctgtgaccggtatcccgaatgcgactttgtatcttgggataaaccgtcaacgaagccg
tgtccgaattgcagcagtttaatggtagagaaaaaaagcaagcaaggcatcaagcttcag
tgtacctcttgcgattattccgaaatggtcgaggaacaggacgaagcagcagatttgtaa
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