Paenibacillus lautus: D5F53_10065
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Entry
D5F53_10065 CDS
T05701
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
plw
Paenibacillus lautus
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plw03019
]
D5F53_10065 (hrpB)
Enzymes [BR:
plw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
D5F53_10065 (hrpB)
Messenger RNA biogenesis [BR:
plw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
D5F53_10065 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
CON_HrpB
HA2_N
ResIII
Flavi_DEAD
DUF2551
PKMT_2nd
HA2_C
Motif
Other DBs
NCBI-ProteinID:
AYB43612
UniProt:
A0A385TLX7
LinkDB
All DBs
Position
2133334..2135844
Genome browser
AA seq
836 aa
AA seq
DB search
MTELPIHRVLPQLKKALSTGTHAVLIAEPGAGKTTQVPLAFLNEPWLAGKRIIMLEPRRI
AARSAAGYMASSLGEAIGETIGYRVRMDSKIGRDTRIEVVTEGVLTRMLQDDPELTGIGM
IIFDEFHERNLQADAGLAFAMESQAVLREDLRLLVMSATLEAEPVAKLLGDAPVIVSEGR
AFPVTTHYLRSFPLDEIHKGAAHAIARALSEQEGDILVFLPGAREIRRTANELLRTGLSP
DVVIRELYSALPAEKQDEAIKRDVNGRRKIVLSTSIAESSITIQGIKTVVDSGYMRTEVF
SPRTGLPQLITRRLSRASADQRRGRAGRVSAGVCYRLWSEEEHRQLPESTIPAIRESDLA
PLALELAVWGARDPEQLAWLDAPPRLAYSQGQALLKQLSALDDTGSITRHGREMALLGAH
PRLAHMLLKAQEIGEASLAIRIAVLLQERDILSRSEALRDQDLRTRVERLLLFEQHGQRS
AQQDTANEAVLQRMKQEIRKLHAQLNIEYAANGDLNLCGLLLSFAYPDRIAKNRGGSGFL
MRSGRGVKLAAVQPMSRARYIVAAAVDDQGADGNIQLASEMDEAWLEEYYLDEMEQEKEV
AWDTASGSIRARQKLMLGAIVVKEQAYPNPTGEEIANALLQGIRQEGLGLFQWSKAAVQL
RERMAFMFRHEAEGDWPDVSDEGLLDRAEAWLLPYLDGLRNRNDIRRLAPGTLLEHMLSW
EQKQQLQKEAPTHIKVPSGSQIPINYSNPEQPFLAVRLQEMFGMQDTPRIAGGRVALTLH
LLSPAQRPVQVTSDLSSFWANGYYEVKKDLKGRYPKHYWPDDPMEAIATNRTRPKA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atgactgaactaccgattcaccgagtattaccacaattgaaaaaggctttatcgactgga
actcatgccgtgttgatcgcggaaccgggtgcaggaaagacgacgcaggtaccgcttgct
tttctgaatgaaccttggcttgccggcaaacggatcatcatgctggagcccagaaggatc
gcggcccgctcagcggcgggatatatggcgtcctcgttgggagaagcgattggtgaaacg
atcgggtaccgggtccggatggacagcaagataggacgggacactcggatcgaggtcgtc
acggaaggcgtattgacgcggatgctgcaggatgatccggaactaaccggcatcggcatg
attatattcgacgaatttcatgagcggaatttgcaggccgatgccggactggcttttgcg
atggaatcccaagcggtgctgcgggaagatttaaggctgctggtcatgtccgctaccctt
gaggcagagccggttgcgaagcttcttggagacgcaccggtcatcgtcagtgaagggcgt
gcttttccggtaacgactcactatctgcgctcgttccctctggacgaaatacataaaggt
gcggcacacgccattgcgcgcgcgctctccgaacaggaaggcgatatactcgtatttttg
ccgggtgctcgcgaaatccggcggaccgcgaatgaattattaagaacgggcttaagccca
gatgtcgtcattcgtgaattatacagcgcgcttccggcggagaagcaggatgaagccata
aaacgcgatgtgaacggacggcgtaaaattgttctgtccacaagcatcgcggagagcagc
attaccattcaggggatcaaaaccgtcgtggacagcggttatatgcgaacagaggtattc
tccccgagaacgggactgccgcaattgatcacgaggcggctgtccagagcgtccgccgat
cagagaagggggagggctggccgcgtatcggccggcgtgtgctatcgcttgtggagtgag
gaagagcaccgccaactgccggagagtaccattccggcgatccgcgaatccgatcttgcg
ccgctggccttggaattggccgtatggggcgcgcgtgatccggagcagctcgcttggctc
gatgcgccgcctcggctagcgtattcgcaaggtcaagcgttattgaagcagctatcggct
ctggatgatacgggcagcatcacccggcatggccgtgagatggcgctgcttggagctcat
cctaggctggctcatatgctgctgaaagcacaggaaatcggcgaggcctcgctggccatc
cgcatcgccgttctgcttcaggagcgcgatatactcagcagaagcgaagcgcttcgggac
caggatttgcgcacgcgcgtggaacggttgctcttgtttgaacagcatggacagcgatcc
gcccagcaggacacggcgaatgaagccgtgctgcagcggatgaaacaagagattcggaag
ctccatgcccagttgaatatcgaatatgcagctaacggagacttgaacctctgcggcctg
ctgctgtcgttcgcctatccggatcggatcgcgaagaacaggggaggcagcgggtttctc
atgcgcagcggcaggggcgtgaagctggctgcggttcagcctatgagccgtgcccggtac
attgtggccgcagccgtagatgatcaaggcgcggacgggaatatccagctagcttccgaa
atggacgaagcctggcttgaggagtattatcttgacgagatggaacaggagaaagaagtc
gcatgggatacagcctccggcagcatcagggccaggcagaagctgatgctgggtgccatc
gtggtcaaggaacaagcttatcccaatccgacaggggaggaaatcgcgaacgccttgctg
caagggatcaggcaggagggccttggcttatttcagtggagcaaggcggctgtgcagctg
agagaacggatggcctttatgtttcggcacgaagccgaaggggattggccggatgtatcg
gacgaaggattgctggatcgtgcggaagcatggctgcttccttatttggatgggctgcgg
aatcgtaatgatatcaggcgtctggcacccggaacgcttttggagcatatgctcagctgg
gagcagaagcagcagcttcagaaagaagcgccgacgcatatcaaggtgccgagcgggtct
cagatcccgatcaactacagcaaccctgagcagccgttcctggccgttcgtctgcaggag
atgttcgggatgcaggatacgccgcgcattgccggagggcgggttgcgctgaccttgcat
ttgttgtcgcctgcgcagagaccggtccaggttacctcggatctgtcgagcttttgggca
aacgggtattacgaggtgaagaaggatctgaagggaagatatcctaagcactattggcct
gatgatccgatggaggcgatcgcaacaaatcggaccaggcccaaggcgtga
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