Paenibacillus lautus: D5F53_12760
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Entry
D5F53_12760 CDS
T05701
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plw
Paenibacillus lautus
Pathway
plw03420
Nucleotide excision repair
plw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D5F53_12760
03430 Mismatch repair
D5F53_12760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plw03400
]
D5F53_12760
Enzymes [BR:
plw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5F53_12760
DNA repair and recombination proteins [BR:
plw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D5F53_12760
MMR (mismatch excision repair)
Other MMR factors
D5F53_12760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C_2
UvrD_C
AAA_19
SLFN-g3_helicase
Viral_helicase1
NACHT
AAA_30
AAA_16
DEAD
nSTAND3
ResIII
Motif
Other DBs
NCBI-ProteinID:
AYB44113
UniProt:
A0A385TKC7
LinkDB
All DBs
Position
2733711..2736125
Genome browser
AA seq
804 aa
AA seq
DB search
MEAKEWQTEQERLERVREKLKARIGELEPVVTGLSDQAAEIRRRFWEEVTVNTSTDEEFE
ETFYTIKQQAAILSERERRHRLLTQQWKNFNQLLPSPYFGRVDFLEDGMNLSEQIYIGVS
SFVDEDGMNFLVYDWRTPIASLYYDHSPGAASYITPMGQISGTMELKRQYQIHNGQIRNM
FDANLTIGDELLQQMLAKGADSQMKSIVSTIQREQNAIIRNDRSRLLIVQGAAGSGKTSA
ALQRVAYLLYKNRDSLKADQIVLFSPNPIFNSYVSSVLPELGEENMQQTTLQEYLEYWLG
PSLRLEDPFDQIEYVLTAQSTPNYETRLQGIQYKASESFMKALQNYAQWLGREGMLFKAI
RFRERDLITAEQMRTQFYSYDPSLSLANRVEQLQKWLLKELSLLERKERKASWVVEELNY
LDNELYAEVFGELHKDREVFDIAEHYAVVNEIKSNKRRGDEGDFDFAGREEELLSQRIVK
KSFKPLRQTVRKLSFIDAHGLYVQLFGDDAAYREKTKASDVPAMWPEICRQTVEKLDRLE
LFYEDATPYLYLKELIEGVRTNTEIRHVFVDEGQDYSPFQYEYLKKLFPRARMTVLGDFG
QAIFMQSTKLQGDDSPLLRLYGEADTSLIRLVRSYRSTREIVEFTKELLIDESDIVPFER
SGPKPLLARFEDRARRDAQLLKDIMSLKADGIDSIAIITKTTAESRQALESLQMQGCEAL
QLITKETVTYQNGVMVVPVYLAKGIEFDAVLVYDASSEAYGRENERKLLYTACTRAMHRL
HLYATGEWSPFVQAVPEHLYVMAT
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaaaagaatggcagacagaacaagaacggctggaacgggtcagggaaaagctg
aaagcaaggattggcgagttggaacctgtggttaccgggctaagcgaccaggctgctgag
atacgtagacgattctgggaagaagtaacggtcaacacaagcacggatgaagaattcgaa
gaaacattctatacgatcaaacaacaggccgcgatattatccgaacgggaacgccggcat
cggcttctgacccagcaatggaagaacttcaatcagttattgccttcgccctatttcggg
cgcgtcgattttctggaagacggcatgaacctgagcgagcagatttatatcggcgtatca
tccttcgtcgatgaagatggaatgaactttctggtgtatgattggcgtactcccatcgca
agtctatactacgaccactccccaggcgcggcctcatacatcacgccgatggggcagatt
tcgggtacgatggagttgaaacggcagtatcagattcacaatggtcaaattcgaaatatg
tttgatgcgaacctgacgatcggcgacgagctgctccagcaaatgcttgccaaaggcgcg
gattcacagatgaaaagcatcgtatccactattcagcgggagcaaaacgccatcatccgg
aacgatcgcagccggcttctgattgtacagggcgcggccggcagcgggaagacttctgca
gccttgcagcgcgtggcgtacttgctgtacaaaaaccgcgattcgctgaaggctgaccag
atcgttcttttctccccgaatccgatttttaacagctatgtatcctccgttcttcccgag
ctcggcgaggagaacatgcagcagacgacgctgcaggaatatctcgaatactggctgggt
ccatccttgcgcctggaggatccctttgatcagattgaatatgtgctgaccgcacaatca
actccgaattacgaaacacgccttcagggaattcaatacaaggcatccgagtctttcatg
aaagccttgcagaattatgcgcagtggctgggccgggaaggcatgctattcaaagccatt
cggttccgggagcgtgatctcattacggcggaacaaatgaggacccagttttacagctac
gacccttctttgagcttggccaatcgggtcgagcagctacagaaatggctcctaaaggag
ctgtcactactggaacgcaaggagcgcaaggcgtcctgggttgtcgaggagctgaactac
cttgataatgaactctatgcggaagtgttcggcgagctgcacaaggatcgggaagtcttt
gacattgccgagcattacgccgtagtgaacgagataaaaagcaataaacgccggggagat
gaaggcgattttgacttcgccgggcgtgaagaggaattgctcagccagcgaatcgtgaag
aagagcttcaaaccgctgaggcaaactgtgaggaaattatcgtttatcgatgcccacggt
ttatacgtccaattgttcggcgatgatgctgcatatcgggaaaaaacgaaggcatccgat
gtccctgctatgtggcctgaaatctgcaggcaaaccgtagaaaagctggatcggctcgaa
ttgttctatgaggatgcgactccatatttgtatttaaaagaactgattgaaggcgttcgg
acgaacacagagattcggcatgtcttcgttgatgaggggcaggattactcgccgtttcaa
tacgagtatctcaaaaaattattccctcgtgcccgcatgacggtactcggcgatttcggg
caggcgatcttcatgcagtccacaaagctgcaaggggacgattcgccgctgcttcggctt
tatggtgaagccgatacaagcttaattcgtctagtgcgcagttatcgttctacacgggag
atcgtggaattcacgaaagaactgcttatcgatgagtcggacatcgtaccctttgagagg
agcggacccaagcctcttcttgctaggtttgaagacagagcgagacgtgatgcgcagttg
ctaaaagacatcatgtcacttaaagccgacggcatcgactctattgccatcattacgaag
actacggccgaaagccgccaagcattggaatcattacagatgcagggatgcgaagccttg
cagctcattacgaaggagaccgtcacctatcaaaacggagtgatggttgtccccgtatat
ctcgcaaagggcatcgagttcgatgcggtcttggtctatgatgcttcgtccgaagcttac
ggcagggaaaacgaacgcaagcttctttatacggcctgtacgagggccatgcaccggctg
catctttacgcgacgggcgagtggtctccgttcgtgcaggcggtgcctgagcatttgtat
gtgatggcaacttaa
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