Paenibacillus lautus: D5F53_17880
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Entry
D5F53_17880 CDS
T05701
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
plw
Paenibacillus lautus
Pathway
plw02024
Quorum sensing
plw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D5F53_17880
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D5F53_17880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plw03019
]
D5F53_17880
03036 Chromosome and associated proteins [BR:
plw03036
]
D5F53_17880
Messenger RNA biogenesis [BR:
plw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
D5F53_17880
Chromosome and associated proteins [BR:
plw03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
D5F53_17880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
DUF150_C
Motif
Other DBs
NCBI-ProteinID:
AYB45032
UniProt:
A0A2A5LR75
LinkDB
All DBs
Position
complement(3914828..3915067)
Genome browser
AA seq
79 aa
AA seq
DB search
MNKSINIQDTFLNQLRKENIPATVYLTNGFQIRGTIKAFDNFTIVIDSDGRQQMVYKHAI
STFMPQRNVSLMQDNNSEQ
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtccataaacatccaagacacgttcttgaaccaactgcgcaaagagaacatt
ccggccacggtataccttacaaacggctttcagatccgtggaacgatcaaagcttttgac
aattttaccatcgtgattgacagcgacggccgtcagcaaatggtgtacaagcatgctatc
tccacgttcatgccgcagcgtaatgtgtccctgatgcaggataacaacagcgaacaatag
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