Paenibacillus lautus: D5F53_20005
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Entry
D5F53_20005 CDS
T05701
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
plw
Paenibacillus lautus
Pathway
plw03022
Basal transcription factors
plw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
D5F53_20005
09124 Replication and repair
03420 Nucleotide excision repair
D5F53_20005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plw03021
]
D5F53_20005
03400 DNA repair and recombination proteins [BR:
plw03400
]
D5F53_20005
Enzymes [BR:
plw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5F53_20005
Transcription machinery [BR:
plw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
D5F53_20005
DNA repair and recombination proteins [BR:
plw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
D5F53_20005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Motif
Other DBs
NCBI-ProteinID:
AYB45439
UniProt:
A0A385TNW4
LinkDB
All DBs
Position
complement(4351078..4352865)
Genome browser
AA seq
595 aa
AA seq
DB search
MHNKPCIVQRDRTILLETAHADAEAAREQLAQYADLIKSPASFHTYRLTPLSLWNAAAGG
MTAEAISSSLQSLSRWDVPAALLEEVRQLVGRYGQLSLLPHPTLECALLLSGNEEALMQE
LTSHRSLREIGVRLISPKEAEVPSDRRGVLKQEMTRLGYPVLDHAGYMDGQYLNILWRGE
KSGSGRLEDSNEGSNDQRFELRDYQQKAAESFRDVGGEGGNGVLVLPCGAGKTVIGIAAM
RELQCETLILTSNTTSVRQWIAELLQKTTLSMEEIGEYSGQRKQVRPVTVATYHILTHRQ
GKGEEQQHMKLFNERRWGLIIYDEVHLLPAPVFRATADIQATRRLGLTATLVREDGRESD
VFSLIGPKRYEMPWKRLEVQGWIASVTCTEIKVPLPDEIREACEAAGKREQYRLAAENPS
KLDVIRQLVDVHKDAQTLIIGQYLDQLHAISRELQAPLITGQMTQDQRNEWYNAFREGTV
RVLVVSKVANFAVDLPDASVAIEVSGSYGSRQEEAQRLGRLLRPKSGENRAYFYALVTED
SREEIFAIRRQLFLIEQGYEYHAIHAKKPAAFLDLIAMRHPRSYQNPDGKEVSWR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
gtgcacaacaagccttgcatcgtccagcgcgatcggaccatacttcttgaaaccgcccat
gcggatgctgaggctgcgcgcgagcagcttgcccaatatgcggatttgatcaaaagtccc
gcgtctttccatacatatcgcttgacccctttatctttatggaatgccgctgccggaggc
atgacggctgaagcgatttcctcgagcctccagtcgttgtcgcgttgggacgtgccggcc
gccctgctggaagaggttcgccagctcgttgggcgttacgggcagctgtcgctgctcccg
catccaacgcttgagtgtgcattgctgttatccggcaatgaggaagccctgatgcaggag
ctgacgtcccatcgatccctgagggaaatcggcgtccgtttgatttcgccgaaggaagcg
gaggtgccttcggaccgccgcggcgtgttaaagcaagagatgacccggctcggctatcct
gtgctggaccacgcgggatatatggacggtcaatacctgaacattctttggcggggagaa
aaatcgggcagcgggcgccttgaagattcgaacgaaggttccaatgatcagcgcttcgag
ctccgcgattatcagcagaaggctgccgaatccttcagggatgtcggcggcgaaggcggc
aatggagtgctggtcctgccatgcggagccgggaaaacggtcattggcatcgccgccatg
cgcgagctgcagtgcgagacgctgatccttacttccaataccacgtcggtaaggcagtgg
atcgccgagctgctgcagaaaacgacgctgtccatggaagaaatcggcgagtactccggt
cagcgcaaacaggtcaggccggtgacggtcgctacctaccacatcttgacccaccggcag
ggcaagggggaggagcagcagcatatgaagctgtttaatgaacggcgctggggcttgatc
atctatgacgaggtccatcttcttcccgctccggtattccgcgcgacggccgacatccag
gcgacccgcaggcttggcctgaccgccactttggttcgcgaggacggaagggagagcgac
gtgttctccctgatcggtccgaaacgatatgaaatgccgtggaaaaggctggaggtacag
gggtggatcgcttcggtgacctgcacggagattaaggtgcctctgccggatgagatcagg
gaagcctgcgaggcggcaggcaaaagggagcaatatcggctggcggccgagaatccctcc
aagcttgatgtgattcggcagctcgtggatgtccacaaggatgcacagacgcttatcatt
ggacaatacctggatcagcttcatgccatttccagagagctgcaggccccgctcatcacg
ggacaaatgacgcaggatcagcgcaacgaatggtacaacgccttccgggaaggaaccgtg
cgcgtgcttgtcgtctccaaagtggctaacttcgcggtcgatctgcccgatgcttccgta
gcgatcgaggtttcgggcagctacggctcgcggcaggaggaagcgcagcggcttggacgt
ttgctgcggccgaagtccggggagaatcgggcttacttttatgcattggtaacggaggac
agccgggaggagatctttgcgatccggcgacagctgtttctgattgagcaggggtacgaa
tatcacgcgatacatgcaaagaagccggcggctttcctggatctgatcgcgatgcgacat
ccccgttcttatcagaatcccgatgggaaggaggtctcgtggagatga
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