Paenibacillus lautus: D5F53_20900
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Entry
D5F53_20900 CDS
T05701
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
plw
Paenibacillus lautus
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plw03400
]
D5F53_20900 (addB)
Enzymes [BR:
plw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5F53_20900 (addB)
DNA repair and recombination proteins [BR:
plw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
D5F53_20900 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AYB45607
UniProt:
A0A385TTD7
LinkDB
All DBs
Position
complement(4544938..4548471)
Genome browser
AA seq
1177 aa
AA seq
DB search
MSVQFVIGRSGSGKSTSIRQEMIERLEHNPKGDPMILIVPEQGSYEAEHALVHAGGIRGM
MRAQVLSFRRLAYRVMQETGGAAKVAISEEGKRMLLYKILRRRKEELHMFGASGEQHGFV
GKLSELYTEMKRYCIDASCVEEQLGQMVSGSGNSPMLRRKLEDIVTVFRDFELEISRFYM
DEEDTLVSLAEGVTESEYIKRADIWIDGFHGFTPQEYRVLREIIAHAKRVTIALTLDKPY
RNGTVPHELDLFHPTAVTYIKLKGIIDEIGLEAEHRMLHPDVLPRFQESPMLAHLERGYD
RKRRWAEPKDDGPDTASSPNRGKKGLLLHAASHRRAEIEGALREMLRLAQEEGARYREMA
VFVRNMGDYEHLMGPLFREYGVPYFLDQKRSELHHPLVEFVRSALDVIGRRWRYEDVFRC
VKTDLLLPLDGSLTREDMDRLENHVLASGIQGTRWTDGRPWKGVPSLSLEEGESEMRNQD
GMAAIEYARKVITEPLHAFEKRMKKAASAMDQSTAVYRLLEECAVPEKLELLSRAALDAG
RPEEAREHRQVWGAVLGLLDQIVEMMGAEKLSTELFTGVLGTGLTEMKMALVPPSLDQVL
IGSMDRTRTGGVKYAFLLGINDGVLPAQFQDDGILTEPERVHLEDRGLELAPSISRRLLD
ERFLIYNALTSASKQLWVSYPAADDEGKPLLPSEVVRHLKLMFQLEEEPLFPRPHAGQSA
LEQEGYAVRPDKTLAYLAGRLRDWRNGEEIPDLWWHVYNWYAEQPGLRPRLTTMLSSLSY
RNEARPLKLETSRQLYGTKLRTSVSRMERFVACPFSHFASHGLKLRERQLYRLQAPDIGQ
LFHAALSSLAVKFQSQHRSWGDLTAEECLREAEATVDRLAPMLQGEILLSSKRYGYISRK
LKNIVGRASVILGEQARRGKFEPIGLELDFGPGKPLPPLAFELPNGTKMEIVGRIDRVDM
ARGEHGIMLRVIDYKSSQKDLRLHEVYYGLSLQMLTYLDVLLTFAEEWLGEQALPAGTLY
FHVHDPVLQSANGMTPEQAAEELLKRYKMKGLLLADREAVSLMDSFLEKGHSAILPVAVK
TDGSFYSSAAVATPDQWETLLSAVRENMLNIGSRITGGDVAIKPYRIQQETACTFCSFRP
VCQFDDAIEGSEYQLLGKPGKDQVWDMLGHPKGGESR
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcaatttgttatcggcaggtcgggcagcggcaagagcacgtcgatccgccaa
gagatgatcgaacggttggagcataatcccaagggggatccgatgatcctgatcgttccg
gagcaagggtcctatgaagcggagcacgcgctcgtccatgcgggaggcattcgcggcatg
atgcgcgcgcaggtgcttagcttccgccgtctggcttaccgcgtcatgcaggaaaccggc
ggagccgcgaaagtggcgatcagcgaggaaggaaagcggatgctgctgtataaaattttg
cggaggcgcaaggaagagctccacatgttcggcgcctcgggagagcagcatggctttgtc
ggcaagctgagcgagctgtacacggaaatgaagcgctactgcattgacgcctcatgcgtg
gaggagcagctgggacagatggtatccggctccgggaactcaccgatgctgcggcggaag
ctggaggacatcgtaacggtctttcgcgattttgaactcgaaatttcgcggttttacatg
gatgaggaagacacgctggtctcattggccgagggtgtgaccgaatcggaatatatcaag
cgtgccgacatctggatcgacggcttccacggctttacgccgcaggagtaccgggtgctg
cgggagatcatcgcacatgccaagcgggtcacgatcgcgctgacgctggacaagccttac
aggaacgggacggttccgcatgagctggatctctttcatcctactgcggtgacgtacata
aagctcaaagggattatcgatgagatcgggctggaggcggagcaccgcatgcttcatccc
gatgttctgccgcggtttcaggaatctcccatgcttgcccatctcgagcgcggttatgat
cggaagagacgctgggcggagccgaaggatgacggcccagacacagcgagcagtccaaac
cgcgggaagaaaggtctgcttttacacgctgccagccatcgccgggccgaaatcgaagga
gctctgcgcgaaatgctgcggctggcacaggaggaaggggcaagataccgcgaaatggct
gtttttgtccggaatatgggggactatgagcatctgatgggtcctttgttcagggaatac
ggcgttccttattttctcgatcagaagcggagcgagctgcaccatccgctggtcgagttc
gttcgctctgcgcttgatgtcatcggtcgccggtggcgttatgaggacgtattccgctgc
gtgaagacggatctgctgctgccgctggacggttcgctcacccgtgaggacatggaccgt
ctggagaaccatgtgctggcctccggaatccagggcacgcgctggacggacggccgtcct
tggaagggagttccgagcctctctttagaagagggggaaagcgagatgcgcaatcaggac
ggcatggcggcgatcgagtacgccaggaaggtgataacggagccgctgcatgcgttcgag
aagcggatgaaaaaggctgcgagcgcgatggaccagagcaccgcggtctatcggctgctg
gaggagtgcgctgtgcccgagaagctggagctgttaagccgggctgcactggatgccggg
cgtcctgaggaagcccgggaacatcgccaggtatggggagccgtcctcggcctgctcgac
caaatcgtcgagatgatgggcgcggagaagctaagcaccgaattgtttaccggcgtgctg
ggtacgggacttacggaaatgaaaatggcccttgtgcctccgtctctggaccaggtgctc
atcggcagcatggaccggacgcggacgggcggggtgaaatatgcttttcttctcggcatt
aacgacggcgtgctcccggcccagttccaggatgacggcatcctgaccgagccggaacgg
gttcatcttgaagaccgcgggctggagcttgccccgagcatatcccgaagactgctggat
gaacggtttctgatctacaatgcgctgacttcggccagcaaacagctgtgggtcagctac
cctgcagcggatgatgaaggcaagccgttactgccatccgaggtggttcggcacctgaag
ctgatgttccagctggaagaggagcctttgttcccaagaccgcatgccgggcaatcggcc
cttgagcaggagggttatgcggtccgtccggacaagacgcttgcttatttagcgggccgc
cttcgcgactggaggaacggagaggagatcccggatttgtggtggcatgtttacaactgg
tatgcggagcagccgggtttgcggccccgcctcacgaccatgctctcctccttgtcttac
cggaatgaagcccggcctctcaagctggaaaccagcagacagttgtacggaacgaagctg
cggacaagcgtatcccggatggagcgctttgttgcctgcccgttctcccattttgcctcc
catggcttgaagctgagagagcggcagctgtacaggcttcaggctcccgacatcggacag
ctgttccatgctgccttgagcagcttggccgtcaagttccaatcgcagcatcgaagctgg
ggagacctgaccgccgaggaatgcctgcgcgaagcggaagcgaccgtggatcggctcgca
cccatgctgcagggtgaaatcctgctcagctccaagcggtatggctatatttcgcgaaag
cttaaaaacatcgtgggcagagcgtcggtcatattgggagaacaggcgaggcgcggcaaa
ttcgagccgatcggcctggagcttgatttcggtcccggaaagccgctgcctcccttggca
ttcgaattgccgaacgggaccaagatggagattgtcgggcgcatagaccgggtcgacatg
gcccgaggcgagcatggcatcatgcttcgggtcattgattataaatccagccagaaggat
ctgcgtctgcatgaggtctattacggcctatccctgcagatgctgacctatctggacgtg
ctgctgacgtttgcggaggaatggctcggcgaacaggccctgcctgcgggaaccttgtac
ttccacgtgcatgatccggtattgcagtccgccaacggcatgacgccggagcaggcggcg
gaggagctgctcaagcgctacaaaatgaaaggcctcctcctggcagaccgcgaagcggtg
tccctcatggattcgttccttgaaaaagggcactctgccatcctgcccgtcgccgtcaaa
accgacggcagcttctacagcagcgcggccgtggcaacgcctgaccaatgggagaccttg
ttgtccgccgtgcgggagaacatgctgaacatcggctcccgcatcacaggcggcgatgtc
gcgattaaaccgtaccggatacagcaggagaccgcctgcacgttctgttctttccgtccc
gtatgtcagttcgacgacgcgattgagggcagcgaataccagctgctgggcaaaccgggc
aaagatcaggtgtgggatatgcttggacatccgaagggaggagagagccggtga
DBGET
integrated database retrieval system
