Paenibacillus lautus: D5F53_21010
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Entry
D5F53_21010 CDS
T05701
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
plw
Paenibacillus lautus
Pathway
plw03030
DNA replication
plw03430
Mismatch repair
plw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D5F53_21010 (holA)
03430 Mismatch repair
D5F53_21010 (holA)
03440 Homologous recombination
D5F53_21010 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plw03032
]
D5F53_21010 (holA)
03400 DNA repair and recombination proteins [BR:
plw03400
]
D5F53_21010 (holA)
Enzymes [BR:
plw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D5F53_21010 (holA)
DNA replication proteins [BR:
plw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D5F53_21010 (holA)
DNA repair and recombination proteins [BR:
plw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D5F53_21010 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delta2
DUF7639
Motif
Other DBs
NCBI-ProteinID:
AYB45627
UniProt:
A0A385TTF7
LinkDB
All DBs
Position
complement(4570761..4571780)
Genome browser
AA seq
339 aa
AA seq
DB search
MDAKAAAKAVKQGDVSSVYLLYGSEKFQMKEFAEFLEAQLIPKEDRDFALVHMDLGEVPI
QTVVEEAETVPFMVQKKLIFVRDTAFFTAAKDNGKVDHRPEALLDYLTDPADYSVIVFMV
GQEKLDERKKVVKAVKKSGVALSFMPLGGEELLRWVDKQVKKSGCTLRAGAAEAIVRNAG
TGLQALSGEIEKLCLYAGADGAIDVATVDMLVARSTEQNVFALVEDIANLRLDKALGIYY
ELLKQREEPIKIAALITRQFRIILQVKTLSTQSYSQQQIASQIGVHPYAVKIAGEQARKF
QTARLEGILNHLANLDYQMKTGAVDKVLGIELFLLRLGA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaaagcggcggccaaggcggtcaagcagggagatgtgtcttccgtctatttg
ctgtacggcagcgagaaatttcagatgaaggagttcgccgaatttctggaagctcagctg
atcccgaaagaagaccgggattttgcgctggttcacatggatttaggggaagttccgata
caaaccgtggtagaggaagcggagacggttccttttatggttcagaaaaaactgatattc
gttcgggatacggctttttttacggctgcaaaagataacgggaaagtggatcatcgtcca
gaggctttgctggattatttgaccgatcccgcagattatagcgtgattgtctttatggtg
gggcaggaaaagctggatgagcgcaagaaggtagtcaaggcagtcaagaagtcgggggtt
gccctctccttcatgcctttgggcggggaagaacttcttcgctgggtggacaagcaggtg
aagaaaagcggctgcacgctgcgcgcaggcgcggcggaagcgattgttcggaatgcggga
accggtcttcaggctttatcgggtgaaatcgagaagctgtgtttgtatgcgggagccgac
ggagccattgatgttgcaaccgtggatatgctggtggcgcgcagcacggaacagaatgtg
tttgcgctcgtggaggatatcgccaatctccgattggacaaggcgctcgggatctattat
gagctgctgaagcagcgtgaggagcccatcaagattgcggccctgattaccagacagttc
cgaatcattctgcaggtgaagacgttatccacccagagctactcgcagcagcagattgct
tcccaaatcggggtgcatccttatgcggtgaagattgctggcgagcaggcccgcaagttt
cagacggcacgtcttgagggcatattgaatcatctcgccaatctggattaccagatgaag
accggggccgtggataaggtgctgggaatcgagttatttctgctgcggcttggcgcgtaa
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