Paenibacillus lautus: D5F53_24565
Help
Entry
D5F53_24565 CDS
T05701
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
plw
Paenibacillus lautus
Pathway
plw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D5F53_24565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plw03019
]
D5F53_24565
03400 DNA repair and recombination proteins [BR:
plw03400
]
D5F53_24565
Enzymes [BR:
plw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D5F53_24565
Messenger RNA biogenesis [BR:
plw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D5F53_24565
DNA repair and recombination proteins [BR:
plw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D5F53_24565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
AYB46274
UniProt:
A0A385TU07
LinkDB
All DBs
Position
complement(5405076..5407661)
Genome browser
AA seq
861 aa
AA seq
DB search
MDDIFELGQRVLLGELDPEQGIKELNGKIIEAELVLRSRSSCLFRLFYGLSRLEENKGTV
LDVAVHLRQFIFAFKRSVRVSTQVIAMIQPVAKLCGIDFFAGMADVDKQLPEWFEHPERI
YDSYELAPRRRNNQVVGDGILYSMTGYKQYQSVFQKQLVQASMNMQPGDTLIASLPTGGG
KSLIGLLPSYLNTQGGELSGGSVEAAGLTIIVVPTVALALDQRKTSRKFFNGTSDERYRP
QAYRGGMPDHERKLILQSIEEGTLPVLYTNPESLMHGQLADTLIASAVRGHVKRLVIDEA
HIIVDWGNHFRPDFQFLASFREKLLRLTKGKLMTVLMSATLTEWSVNVLRELYGTEGKIT
EIRCDALRPEPTYFVSRHEDAAKRLKNVTQMLGYMPRPAILYVNTKEDAESWYKQLIEQG
YSSVAVFTGDADDEERKALLDQWNHDQIDIMVATTAFGMGVDKPDIRTIIHACLPESFNR
YYQEVGRGGRDGLASIGWLNFVPEDVKVIRGITSKTTISVDILVERWMQMFANAETTEKS
DELWVDLSTQPPRLRHTVSGETNQGWNASIILLMQRHGILKVIEVDYEYGNKSINRKVRI
RLLEHYSIEDPDWLTKRVQPNRDEERLLISEQLLEMQRYAESSEEYCIADYLTRTYRYSA
HVCGGCPRCYKLNVLQSYNDTKAMIISRSNNAIVYPELVSSLSPYLIAYRDLILETDDDS
WYERLGADTLSALVRANVPLLILPGDEPLPVEWMHKLPSEKEGRKYSLLEPSEWSQADVR
DCVGNVAAIMYSNTVEIANRQYVWSKSYLAANPANRVIHIVNPSIFIMNEGKTLEHVLDA
HMLPLKGFLSRQKARNQYYMV
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggatgatatatttgaactaggacagcgcgttttgttaggcgaactcgatcccgaacaa
ggtataaaggaattgaacggaaagataattgaagcagaactcgttcttcgttctcgttca
tcatgtctgtttcgtttattctacggcttgtcgaggcttgaagaaaataaggggactgta
ctagacgtggccgttcatcttcgtcagtttattttcgcatttaagcgcagcgtgcgtgtc
tcaacccaggtaatagcgatgattcaaccggtggcgaagctttgcggaattgactttttt
gctgggatggccgatgtcgacaaacaactaccagagtggtttgaacatccagaaagaata
tacgatagttacgaattggcgccaagacgcagaaacaaccaagtagtcggggatggcatt
ctatactctatgacagggtataagcaatatcagagcgtctttcaaaaacaattagttcaa
gcaagcatgaacatgcaaccaggagatactctgattgcaagccttccgacgggaggcggc
aaaagtttaatcgggttattgccttcatatctaaatacacaagggggggaattgtccgga
ggatcggtagaagcggcagggttgacgataatagtagtgcccacggtcgcgcttgctcta
gatcagcggaagacgtcccggaaattctttaatggaacatccgacgaaagataccgccct
caagcttatcggggtggcatgccggaccatgaacgaaaactcatcttgcagagcatcgag
gaaggaacgttaccggttctatatacgaatcccgaatcacttatgcacgggcaacttgcc
gatacgttaatcgcctctgcggtcagaggacacgtcaaacggctagtgattgacgaagcg
cacattattgtggattggggcaatcactttaggccggactttcagtttctcgcgtcgttc
cgtgagaaattgcttcgacttacgaaaggcaaactgatgaccgtgttgatgtcggctaca
ttaacggagtggtctgtgaacgtattacgagaattgtacggcacggaagggaaaataact
gagatccgatgcgatgccctccggccagaaccaacttatttcgtaagccgtcatgaggat
gctgcgaaacgtctgaagaacgtcacgcaaatgttagggtatatgccgagaccagcgatt
ctttatgtaaatacgaaggaagatgccgaatcgtggtataagcaactaattgaacaaggt
tatagttcagtcgcggtatttacgggagatgcggacgatgaagagcgcaaagcactactg
gatcagtggaatcacgaccagattgatattatggtggctacaaccgcattcggaatgggg
gtcgataaaccagatatacgtaccattatccatgcttgtttaccggaaagtttcaatcga
tactaccaggaggtcggtcgaggtggacgggatggccttgcttcaattggatggcttaac
tttgttcctgaagacgtaaaagtcatcagaggcataacttctaagacgactatctccgta
gatattcttgtagagcgatggatgcagatgtttgcaaacgctgagacaacggagaaatca
gatgagttatgggtcgatttgagcactcaacctccaagactgcgacatacggtgtctgga
gaaaccaatcagggctggaacgcctcgatcattctcctaatgcagcgtcacggcattctg
aaagtaatagaagtagactatgaatacggaaataaaagtattaaccgcaaagtaaggata
aggctgttggaacactacagcatcgaagatcctgattggttaactaagcgggtgcaaccg
aatcgggatgaagaacgactactcatatctgaacaacttctcgaaatgcaacgttacgca
gaatcctcggaagaatattgcatcgccgattatttaacgaggacttatcgctatagcgcg
cacgtatgcggagggtgcccacgttgctataagttaaacgtgcttcaatcatataacgat
acgaaagctatgattatatcacgttcgaataatgccatagtttatcccgaactcgtatcg
tctctctctccttacttaatcgcctatcgggacttaatactggaaacggatgatgactct
tggtatgagagacttggcgcggatacattatcggcgctcgttcgagcaaacgtgccgctg
ttgatcttacctggggatgaaccattgccggttgaatggatgcataaattgccgtcggag
aaagaaggcaggaaatattcgttactagagccttccgagtggagtcaagcggacgttagg
gattgtgtgggtaacgttgccgcaattatgtattcaaacacagtagaaattgccaatcgg
cagtatgtatggtctaagagttatctagcagcgaatcccgcgaatcgcgtcatacatatc
gtgaatccctcgatcttcattatgaacgaagggaaaacactcgagcatgtattggatgca
catatgttaccattaaaggggtttttatctaggcagaaggcgcgcaaccaatattacatg
gtctaa
DBGET
integrated database retrieval system
