Paenibacillus lautus: D5F53_28960
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Entry
D5F53_28960 CDS
T05701
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
plw
Paenibacillus lautus
Pathway
plw03030
DNA replication
plw03430
Mismatch repair
plw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D5F53_28960 (dnaX)
03430 Mismatch repair
D5F53_28960 (dnaX)
03440 Homologous recombination
D5F53_28960 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plw03032
]
D5F53_28960 (dnaX)
03400 DNA repair and recombination proteins [BR:
plw03400
]
D5F53_28960 (dnaX)
Enzymes [BR:
plw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D5F53_28960 (dnaX)
DNA replication proteins [BR:
plw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D5F53_28960 (dnaX)
DNA repair and recombination proteins [BR:
plw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D5F53_28960 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
DnaX_C
AAA_30
RuvB_N
TIP49
AAA_22
RCF1-5-like_lid
AAA_5
AAA_19
AAA_16
AAA_7
AAA_2
AAA_assoc_2
AAA_14
Rad17
AAA_28
PIF1
RNA_helicase
nSTAND3
AAA_18
DUF815
Rotamase_3
Motif
Other DBs
NCBI-ProteinID:
AYB47080
UniProt:
A0A385TRM0
LinkDB
All DBs
Position
complement(6444343..6446058)
Genome browser
AA seq
571 aa
AA seq
DB search
MEHIALYRAWRPQSFGDMVGQQHIIQTLQNAIREQRVSHAYLFSGPRGTGKTSAAKILAK
AVNCEHGPAEEPCNACEACRRITSGAVMDVQEIDAASNRGVEEIRDLREKVKYAPTEVRR
KVYIIDEVHMLTTEAFNALLKTLEEPPAHVMFILATTEPHRLPATIISRCQRFDFRRVSL
EEQTGRLEQICGEEGITAEHEALQYIARLSDGGMRDALSILDQIASFTGGIVSYRQVMDM
TGGIASEQFGRLAGAVKQGDAGLVLQIVEQFMQEGKSADKCMENLLYYFRDLLMIKMVPD
ADKLTDRVLNPAEFQEMANAFSRDELFQMIDTLNRYQSEMKYASQPQTLFEVALLKLSGI
TQSGGGAAAAHSTADAGELAQLKQHVAALEKKLERLIQNGVPASNQREPAKPARTPAPKA
ASTAKIPQHMDQYVSSRTGEDYTAVHRQWAQILQNVKEEKVTVHAWLMDGEPVSVWEDKV
LVAFKNNIHRETTEKPANKQVIEGVLESMLGKPYHLVTMMLRDWNDAVEGVGKPQAEELK
LEHEEADAGGEKPWIDEAIQLFGEDLVVIKD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
gtggaacatatcgcgttatatcgagcttggcgaccacagtcgttcggcgacatggtgggc
cagcagcatattatccagaccctgcagaatgccattcgcgagcagcgggtttcccatgcc
tacctgttcagcggtccacggggtacgggcaagaccagtgccgctaaaattttggccaaa
gccgtgaactgcgagcatggtccggctgaggaaccctgcaatgcatgcgaggcctgccgg
cgcataacgtccggagccgtcatggatgtccaggagatcgatgcggcatccaaccgcggc
gtcgaggaaatccgtgatttgcgggagaaagtcaaatacgcaccgaccgaagtgcggcgc
aaggtttatattattgatgaagtacacatgctgacgacggaagcgttcaatgctttgctg
aaaacgctggaggagccgccggcacacgtgatgtttatactagcgacaacagagccgcat
aggcttccggcaacgattatctcacgctgtcagcggtttgacttccgcagggtttccctg
gaggaacaaaccggacgtctggagcagatttgcggggaagaaggcattacggccgagcat
gaagcgctgcagtatattgcccgtttatcggatgggggtatgcgcgatgcactgagcatc
ctggatcagattgcttccttcaccggaggtatcgtatcttaccgacaggtcatggacatg
acgggaggcattgcctcagagcagtttggccgtctggccggcgccgtgaagcagggggat
gccgggctggtcctgcagatcgtggagcaatttatgcaggagggaaaaagcgcagataaa
tgcatggagaatcttctgtactatttccgcgatttgctcatgatcaagatggttcccgat
gccgacaaactgaccgatcgggttctgaacccggccgagtttcaggagatggcgaatgcc
ttcagccgggatgagctgtttcaaatgatcgatacgcttaaccgttatcagagtgagatg
aaatatgcctcgcagccgcaaaccctgtttgaggtggcactgctcaagctttccggcatt
acccaatccgggggcggggctgcagctgcccattctaccgccgatgcgggagaactggct
cagctgaagcagcatgtagccgcgcttgagaaaaagctggagcgtctgattcaaaacggc
gttcctgcatcgaatcaacgcgaaccggccaagcctgcccgtacacctgcaccgaaagca
gcttcaacggccaagattccgcagcatatggatcagtatgtatcctcccggacgggagag
gattataccgctgttcatcggcagtgggcccaaattctgcaaaacgtgaaagaggagaag
gtaacggttcacgcatggctgatggatggtgagcccgtatccgtatgggaagacaaggtt
cttgtcgctttcaaaaacaacatccaccgtgaaaccaccgagaaacctgccaacaaacag
gtgattgaaggggttcttgagtctatgctcggcaagccgtatcatctggtgaccatgatg
cttcgcgactggaatgatgcggtagaaggagtaggcaagcctcaggcggaagagcttaag
ctggaacatgaagaagctgatgccggtggagaaaaaccatggattgatgaggcgatccag
ctgtttggagaagacctcgttgtcataaaagactag
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