Paenibacillus lautus: D5F53_29070
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Entry
D5F53_29070 CDS
T05701
Name
(GenBank) oligogalacturonide lyase
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
plw
Paenibacillus lautus
Pathway
plw00040
Pentose and glucuronate interconversions
plw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
D5F53_29070
Enzymes [BR:
plw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
D5F53_29070
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Motif
Other DBs
NCBI-ProteinID:
AYB47100
UniProt:
A0A385TRP7
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All DBs
Position
complement(6469665..6470810)
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AA seq
381 aa
AA seq
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MAKGTVWRPERKLYRDRLTGVEVVQLTDYKAHSHHLYFTESGWYDGGKRLLFVSDRDNSS
NLYSMDINSGEMLQLTDYPDNDAVDACLLPDGRAAFVKTDRSVRRLDLATLKEELIYEAP
EGYNIGNLSCPADGRSVVTCIQEDLSHRMPLDLGNGYVGHRELMEAAPHSRIVRIDSEGQ
AQPETLYEAHRFITHINASPVEPWLITFCHEGPWHLVDHRIWGLDLRSGEAWRIRQRLEP
GEKVGHEFFYPDGMTIGYHGFRMDGTNFFGSIRYDNTSMEETDFGFDTWHAYADGYGQAV
VDGKGAVKTISVWRKDAKGVYQGPRMLCELRCSFHSQKVHAHPRFDPGGQRLLFTSDKNG
YGNLYLVDMPEDFDSLPLLSV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggccaagggaacggtgtggaggccggaacgtaagttatatcgcgaccggttgaccggg
gtcgaagtggtgcagctgaccgactacaaagctcacagtcatcatctgtactttacggaa
agcggatggtatgacggcggcaagcggctcttgtttgtatcggacagggacaacagctca
aacttgtacagcatggatatcaacagcggtgagatgcttcagctgacggattaccctgac
aatgatgctgtggatgcttgtctgttaccggatggccgggccgcctttgtcaaaacggat
cggagcgtacgccgccttgatctggcaacattgaaggaagaactgatctacgaagccccg
gaggggtacaacatcggcaatctgagctgtcctgcggatggacgctcagtcgtcacctgc
atacaggaagatctgtcccatcgcatgccgctggatctaggcaacggctatgtcggccat
agggagttgatggaggccgccccccacagccggatcgtgcggatcgactcggaagggcag
gcgcagccggaaaccctatatgaagcccatcgttttataacccatattaacgcgtcaccc
gtcgaaccatggctgatcaccttctgccacgaaggaccttggcatttggtcgatcaccgg
atatgggggctggaccttcggagcggagaggcttggagaattcgccagcgccttgaaccc
ggagaaaaggtcggccatgaatttttttatcctgacggtatgaccatcggttaccatggc
ttccgtatggatggaactaatttcttcggaagcatccggtatgacaatacgtccatggaa
gagacggacttcgggtttgatacgtggcatgcgtatgcggacggctacggtcaggccgtt
gtcgatggcaagggggcggtcaaaaccatctccgtatggcgtaaagacgccaaaggagtc
taccaaggaccgcgaatgctgtgcgagcttcgatgcagctttcattcccagaaggtgcac
gcgcatccgcgttttgatccgggcggtcaacgactcttgtttacaagcgataaaaatggt
tacggcaatctgtatctggtcgacatgccggaagatttcgattcgctgccgctgctgtcg
gtctaa
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