Paenibacillus lautus: D5F53_29925
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Entry
D5F53_29925 CDS
T05701
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
plw
Paenibacillus lautus
Brite
KEGG Orthology (KO) [BR:
plw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plw03032
]
D5F53_29925 (gyrB)
03400 DNA repair and recombination proteins [BR:
plw03400
]
D5F53_29925 (gyrB)
Enzymes [BR:
plw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
D5F53_29925 (gyrB)
DNA replication proteins [BR:
plw03032
]
Prokaryotic type
DNA Topoisomerases
D5F53_29925 (gyrB)
DNA repair and recombination proteins [BR:
plw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D5F53_29925 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AYB47259
UniProt:
A0A385TTY4
LinkDB
All DBs
Position
complement(6633243..6635153)
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AA seq
636 aa
AA seq
DB search
MSMNQPTYDENQIQVLEGLEAVRKRPGMYIGSTSAKGLHHLVWEVVDNSIDEAMAGICDH
IEIIVHEDNSITVIDNGRGIPVGENAKLKKSTLEVVMTVLHAGGKFGGGGYKVSGGLHGV
GVSVVNALSSKVVVQVKRDGHIYQQEYHRGIPQYDIKVIGDSDDTGTTVTFLPDPEIFTE
TTVYDYNTLLTRIRELAFLNKGIALTLTDERTGASDYFKYEGGIIEYVKFLNEKKEALHE
DPIYVEGSRDNIQVEVSLQYNDSYTENIYSFANNINTHEGGTHESGFKSALTRIINDYAR
KTGLIKDNTNNLSGDDVREGLTAIISVKVPEPQFEGQTKTKLGNSEVRGIVESLFAEKLQ
EFLQENPSVSRRILEKALQASRAREAARKAREMTRRKSALEVSALPGKLADCSSKDASIS
ELYIVEGDSAGGSAKQGRDRHFQAILPLRGKILNVEKARLDRILSNAEIRAIITALGTGI
AEDFDLSKARYHKIIIMTDADVDGAHIRTLLLTFFYRYMRKLVEAGYIYIAQPPLFKIER
NKVIRYAGSEKERDEIIREFGENVKINVQRYKGLGEMNAGQLWETTMDPESRTMLQVTIE
DAILADTLFDTLMGDNVEPRRDFIQEHAKSVRNLDV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaatcaaccgacatatgatgagaatcagattcaggtactggaaggattggaa
gccgttcgtaaacggccgggtatgtatatcggttctaccagcgccaagggtttgcatcat
ttggtatgggaagttgtggacaatagtattgacgaagcgatggcgggaatatgcgaccat
atcgaaatcattgtccatgaggataacagcataaccgttatcgataacggacgcggcatt
ccggtcggcgagaacgccaagctgaagaagtcgacgctggaagtggttatgaccgtcctt
catgccggcggtaaatttggcggcggcgggtataaagtatccggcggtctgcatggcgtc
ggtgtttcggtcgtgaatgcactgtcttcgaaagtcgtcgttcaagtcaaacgcgacggg
cacatctaccagcaggagtatcatcgcggcatacctcaatatgatatcaaggtcattggg
gattccgacgatacaggtacaaccgtaaccttcctgccggatccggagatttttacggaa
acgacggtttatgattataacacccttttgacgcggatccgcgagttggcattcctgaac
aagggcatcgcgcttacgctgacggatgaacgtacgggtgcctccgactatttcaagtac
gagggcggaatcatcgaatacgtcaaattcctgaatgagaagaaggaagcactgcacgag
gacccgatctatgttgaaggctcacgggataatattcaggtcgaagtatcgcttcagtat
aacgacagctataccgagaatatttattcgtttgccaataatatcaacacgcatgaaggc
ggaacgcatgaatccggctttaagagtgcgctcactcgaatcatcaatgactatgcccgc
aaaacgggactgatcaaagacaacaccaacaacctgtcgggtgacgatgtccgtgaagga
ctgacggcgatcatctcggtcaaagtaccagagccgcaattcgaaggacaaacgaagacc
aagctcggcaacagcgaagtgcgcgggatcgtggaatccttgttcgcggagaagctgcag
gaattcctgcaggagaacccgtcggtttcccgccggatcttggagaaggcgctccaggca
tcgcgtgcccgcgaagcggcgcgtaaagcccgcgagatgacgcgccggaagagtgccctt
gaagtcagcgctttgccgggtaaactggcggactgctcctccaaggacgcttccatcagt
gagctgtacatcgtcgaaggtgactctgccggcggttccgccaagcaggggcgcgatcgg
catttccaggcgattttaccgctgcgtggtaaaatcctcaacgtagaaaaggcgcggctt
gaccgcatcctgtccaatgcggagatccgagccatcattaccgctctgggcacggggatt
gcggaggatttcgatctttccaaagcccgttaccacaaaatcattatcatgaccgatgcc
gacgtcgacggtgcgcatattcgtaccttgctgctaacgttcttctaccgttacatgcgt
aagctggtggaagcgggttatatctatatcgcccaaccgccgctcttcaagattgagcgc
aacaaggtgatccgttatgccggcagcgaaaaagaacgcgacgagatcattagggaattc
ggcgagaacgtcaagatcaacgtacagcgctacaagggtcttggcgagatgaacgccggc
cagctgtgggagacaacgatggatccggagagccgtacgatgctccaagtgacaatcgag
gatgcaatcttggccgatacgttgtttgataccctaatgggcgataacgtggagccgcgc
cgggatttcattcaggagcatgcgaagtcggtccggaatttggacgtataa
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