Planococcus sp. MB-3u-03: CW734_01980
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Entry
CW734_01980 CDS
T05387
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
plx
Planococcus sp. MB-3u-03
Pathway
plx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
plx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CW734_01980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plx03021
]
CW734_01980
03400 DNA repair and recombination proteins [BR:
plx03400
]
CW734_01980
Enzymes [BR:
plx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CW734_01980
Transcription machinery [BR:
plx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CW734_01980
DNA repair and recombination proteins [BR:
plx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CW734_01980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
Dockerin_1
Motif
Other DBs
NCBI-ProteinID:
AUD12643
LinkDB
All DBs
Position
152387..153331
Genome browser
AA seq
314 aa
AA seq
DB search
MLEIEKPKIETVEIDSNAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTVEGVEEDVASIILNIKKLALKIYSDEEKVIEIDVKGDGTVTAADITHDSDVEI
LNPDLYIATIAKDGHLRMRMYANRGRGYARADQNKREDLPIGVIPIDSIYTPVSRVNFQV
ENTRVGQLAHFDKLTLDVWTDGSIGPKEAIALGAKIFTEHLNIFVGLTDEAQTAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVHELANKSEDDMMKVRNLGRKSLEEVK
VKLEDLGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaatagaaaaaccaaaaattgaaacggttgagatcgacagcaatgccaaatac
ggcaaattcgttgttgaaccccttgagcgtggatatggtaccactttaggtaactcctta
cgtcgaatcttactttcatctttaccgggcgcagctgttacttcgatccaaattgatggc
gttttgcatgaattctccactgtcgaaggtgtagaagaagatgttgcctctatcattttg
aacatcaagaagctcgctttgaaaatttactctgacgaagaaaaagtcattgaaattgat
gtaaaaggtgacggaacggttacggctgcagatatcactcacgatagtgacgtggaaatt
ctgaatccggatctatatattgcgacaatcgcgaaagacggccacttgcgcatgcgcatg
tatgctaaccgcggccgtggatatgcccgtgcagatcagaacaaacgtgaagatcttccg
atcggcgttatcccgattgactctatttatacgccagtttcacgcgtcaatttccaagtg
gaaaatacccgtgtgggccaactcgctcatttcgataaattaaccctcgatgtctggaca
gatggaagcatcggtcctaaagaggcaattgcgcttggcgcgaaaattttcactgaacat
ctgaacatcttcgtaggattgacggatgaggctcaaacagctgaaatcatggttgaaaaa
gaagaagaccaaaaagagaaagtgcttgagatgactatcgaagagcttgatctttctgtt
cgttcttataactgcctgaaacgtgccggcattaacactgtccacgaattggccaacaag
tcggaagacgacatgatgaaagttcgcaacctcggacgcaaatcacttgaagaagtgaaa
gtgaagttggaagatctaggtcttggccttcgtaaagaagactga
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