Planococcus sp. MB-3u-03: CW734_03910
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Entry
CW734_03910 CDS
T05387
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
plx
Planococcus sp. MB-3u-03
Brite
KEGG Orthology (KO) [BR:
plx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plx03021
]
CW734_03910
Transcription machinery [BR:
plx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CW734_03910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
GerE
HTH_23
HNF-1_N
HTH_37
HTH_3
Packaging_FI
DUF1492
DUF134
KORA
Sigma70_ECF
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AUD12987
LinkDB
All DBs
Position
517694..518476
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AA seq
260 aa
AA seq
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MSKQSHPNQPTKEQVLEWIEAYQKTEDEEAQTNLVLNYRRLVESIARKYSNGKSYHEDIA
QVGMLGLLGAIRRYDPSYGRSFEAFAVPTIIGEIKRFLRDKTWAIHVPRRIKELGPRIKA
TVEVLTTELQRSPQVWEIAEYLDVDEDDVLEAMEMGKSYQALSMDHSLEADSDGSTVTLF
DVVGQEDDGYEKADQRMLVAEAMNVLSDREKQIIQYTYIEQLSQKEAGDRLGISQMHVSR
LQRKAIKKLQEAILAAGGVS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaacaatctcatcctaatcagccaacgaaagaacaggtactggaatggattgaa
gcttatcaaaaaaccgaggacgaggaagcacagacaaaccttgtccttaattaccgtcgt
ctcgtggaatcgattgcccgcaagtattcaaacgggaaatcctatcacgaagacatcgca
caagtgggcatgcttggcttgctcggtgcaatccggcgttatgatccatcctatggccgc
agcttcgaagctttcgcggtgccgaccatcatcggcgagatcaagcgctttttgcgtgac
aaaacatgggcgatccatgtgccgcgccgcataaaagagctgggcccacgaatcaaagcg
actgttgaagtactgacgacagagcttcagcgttctccacaggtttgggaaatcgctgaa
tatctggatgtcgacgaagacgacgttttggaagcgatggagatgggcaaaagctatcaa
gcgctttccatggaccattcactcgaggcggattcggacggcagtacggttacattgttt
gatgtagtcggccaagaagatgacggatatgaaaaagcggatcagcgcatgctcgtggcg
gaagcgatgaatgtcctttccgatcgggaaaagcagatcatccaatacacctacatagag
cagctgagccagaaggaagcgggcgaccggctggggatttcccagatgcacgtttcacgc
cttcaacgaaaagctatcaaaaagcttcaggaagctattttggctgccggcggggtttcc
tag
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