Planococcus sp. MB-3u-03: CW734_06735
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Entry
CW734_06735 CDS
T05387
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
plx
Planococcus sp. MB-3u-03
Brite
KEGG Orthology (KO) [BR:
plx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plx03019
]
CW734_06735
Messenger RNA biogenesis [BR:
plx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CW734_06735
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
DUF7597
Motif
Other DBs
NCBI-ProteinID:
AUD13425
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All DBs
Position
1104081..1105019
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AA seq
312 aa
AA seq
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MTKGITTRAVGETVDDFLLIKQSVKGVTTTGNPFISLVLQDKSGDIEAKLWDTKDEHERM
YAAETIVRVGGEIHNYRGKNQLRIKSIRPAKPEENLTIAEFLPSASQSADELHEEVTKFL
FEMENPQIQRITRHILKKYQQQFLTFPAATRNHHDYVSGLADHVVSMLKLGKAICEVYPS
LDKDLLYSGIILHDIGKVFELSGPVATTYTVEGNLLGHISIMVTEIAKAAEELGIEGEEV
MILQHIVLSHHGKEEWGSPKKPMVKEAEILHYIDNIDAKMMMLDRVLGKTKEGEFSERVF
ALDNRSFYKPKL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaggaattacaacccgcgctgtcggggagacagtcgatgattttcttctgatc
aaacaatcggtcaaaggcgtcacgacgaccggcaacccattcatttcactcgttctgcaa
gacaagagcggagacatcgaggcaaagttatgggacacgaaagacgaacatgaacggatg
tatgcggcagaaacgattgtcagagtcggcggggaaatccataattaccgcggcaaaaac
caactgcgcattaaaagcatccgcccggcaaagccggaggagaacttgacgattgccgag
tttctgccttcggcgtcacaaagtgcagatgaattgcacgaagaagtgacaaaattcctg
ttcgagatggaaaacccacaaattcagcgcatcacgcgccatattctgaagaaataccag
cagcaattcctgaccttcccggccgcgacgcgcaatcaccacgattatgtgtcaggcctt
gcagatcatgttgtctcgatgctcaagctcgggaaagcgatttgtgaagtgtatccgagc
ctggataaggatttattgtattccggaatcattctccacgatatcggcaaagtctttgaa
ctttcagggccggttgcaactacttataccgtagaaggcaatttgctcggccatatctcg
atcatggtgaccgaaatcgcaaaagctgcggaagagctcggcatcgaaggggaagaagtc
atgatcctccaacatatcgtcttgtcgcatcacggcaaggaagaatggggaagcccgaaa
aaaccgatggtgaaagaggcggaaatccttcattatatcgacaatatcgatgcgaaaatg
atgatgctcgaccgtgtgctcggaaaaacgaaagaaggcgagttctcggaacgcgttttc
gcactcgacaaccgctcattctacaagccgaaactataa
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