Planococcus sp. MB-3u-03: CW734_08605
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Entry
CW734_08605 CDS
T05387
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
plx
Planococcus sp. MB-3u-03
Pathway
plx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CW734_08605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plx03400
]
CW734_08605
Enzymes [BR:
plx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CW734_08605
DNA repair and recombination proteins [BR:
plx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CW734_08605
RecFOR pathway proteins
CW734_08605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
nSTAND3
NB-ARC
DUF815
AAA_22
Bac_DnaA
RNA_helicase
Sigma54_activat
AAA_25
MCM
AAA_3
TsaE
NTPase_1
AAA_14
AAA_24
Sigma54_activ_2
TniB
IstB_IS21
NACHT
AAA_18
Rad17
Resolvase
AAA_17
AAA_19
Parvo_NS1
AAA_28
ATPase_2
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
AUD13694
LinkDB
All DBs
Position
1465050..1466048
Genome browser
AA seq
332 aa
AA seq
DB search
MEERIIDGEISEFDERFEQSLRPQRLSQYIGQQKVKHNLEIFIEAAKMRNESLDHVLLYG
PPGLGKTTLATVIANEMEVGVKMTSGPAIERPGDLAAIVSSLEPGDVLFIDEIHRLNRSI
EEVLYPAMEDFCLDIVVGKGPTARSVRLDLPPFTLIGATTRAGALSAPLRDRFGVLSRLE
YYDTEALTDIVERSAALFEADIDPHAAIEIARRSRGTPRIANRLLKRVRDYAMVRGNGSI
TTEMAEQALEMLQVDPLGLDHIDHKLLTGMISRFRGGPVGVDTIAASIGEESTTIEDVYE
PYLLQIGFIQRTPRGRTVTPLAYEHFKMEMPE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacgcattatcgacggcgagatttcggaatttgatgagcgctttgaacaatcg
ttgcgtccacagcgtttgtcgcaatatatcggccagcagaaagtaaagcacaatttggag
attttcatcgaagcggcgaaaatgcgcaacgaatcgcttgaccatgtgctgctttacggg
ccgccgggtctcgggaaaacgacgctggcgaccgtcatcgccaatgaaatggaagtcggc
gtgaagatgacttctggccccgcgattgaacggcccggcgatttggcggcgatcgtttcg
tcactcgagccgggagacgtattgttcatcgatgagatccatcgattgaaccgttcgatc
gaagaagtgctgtatccggcgatggaggatttctgcctcgatatcgttgtcggcaaaggc
ccgactgcacgttctgtgcggctcgatttgccgccgttcactttgatcggggcgacgacg
cgcgcaggcgcattatcggccccgctgcgcgatcgtttcggcgtcttatcaaggctcgag
tattacgacacggaagccttgacggatatcgtcgaacgcagcgccgctttgttcgaagcg
gatatcgacccgcatgctgccattgagatcgcacgccgttcccgcggcaccccgcgtatc
gcgaaccgcttgctaaaacgcgtgcgcgattacgcgatggtgcgcggcaatggctcgatc
acgaccgaaatggccgagcaagctttggagatgctgcaagtagacccgctcggtcttgac
catatcgaccacaagctactcaccggcatgatcagccgtttccgcggtgggcctgtcggc
gtggacacgatcgctgcaagcatcggcgaggaatcgacgacgatcgaagacgtctacgaa
ccgtatctattgcagatcggctttattcaacggacaccgagagggcgcactgtgacgcct
cttgcatacgaacactttaaaatggagatgcctgaatga
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