Planococcus sp. MB-3u-03: CW734_11205
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Entry
CW734_11205 CDS
T05387
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
plx
Planococcus sp. MB-3u-03
Pathway
plx03030
DNA replication
plx03430
Mismatch repair
plx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CW734_11205 (polC)
03430 Mismatch repair
CW734_11205 (polC)
03440 Homologous recombination
CW734_11205 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plx03032
]
CW734_11205 (polC)
03400 DNA repair and recombination proteins [BR:
plx03400
]
CW734_11205 (polC)
Enzymes [BR:
plx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CW734_11205 (polC)
DNA replication proteins [BR:
plx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CW734_11205 (polC)
DNA repair and recombination proteins [BR:
plx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CW734_11205 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
RNase_H_2
DNA_pol_A_exo1
HHH_3
DEDDh_C
DNA_polI_exo1
T2SSK
NUP50
Motif
Other DBs
NCBI-ProteinID:
AUD14090
LinkDB
All DBs
Position
complement(1971250..1975557)
Genome browser
AA seq
1435 aa
AA seq
DB search
MINEQDAKMRFKLLLQHLELTDDVHMPYFEGAELTRMTVHKKDRAWRFIVKLKQVLPLEL
FIIFRERLQAKFSSIASVQVHIETPTQQAEGEQVAAYWRHVVDELADMAPPLRERLLSQA
PVWNGNKLIVDCCHEHEMMALKSKYTDKLSQVFQQFGFPAFSIDFQLSAEDQQEARAAFM
EERKAEEEAMAKRAVADMKKRETERKENGAPSGPFQMGSAIKPDEPIVEIRSIVDEERRV
TIEGFVFDVEVRELRSGRSLLTVKMTDYTDSILVKMFSRDKEDAELMAQAKKGMWLRARG
SIQTDTFVRDLVMMSNDMVEINPSVRKDTAETKRAELHLHSPMSQMDAVSSIESLVAQAA
KWGHPAIAVTDHAGVQAFPDAYAASQKHGIKAIFGLEANLVDDGVPIAYEERHALLEEET
FVVFDLETTGLSAVYDTIIELAAVKIKGGNIIDKFERFANPHHPLSATTIDLTGITDDMV
RNAPEVEDVIREYHEWAGDHIMVAHNASFDMGFLYVAYKKYGIDKTHATIDTLELARMLH
PEMKNHRLNTLAKKFNIELTQHHRAIYDTEATAYLLTHLLKEADDKGILYHDQLNDYVGT
GDSYKRSRPTHCTLLAKDQEGLKNLFKLVSASHINYFYRVPRIPRSLLQRHRKGLLVGSG
CDKGEVFEAVMQKSMEEVERTAQFYDYLEVHPKEVYQPLIDRELIRDEWNLEDIIRKLAK
VSRKLDKPLVATGNVHYLDETDAIFRQVLIGSQGGANPLNRSTLPKVHFRTTNEMLDAFD
FLGEETAREIVVDNSLKIADMIDVVKPIKDELYTPKIEGADEEVRELSYTMARSIYGDDL
PEIVEARIEKELKSIIGHGFAVIYLISHKLVKKSLDDGYLVGSRGSVGSSLVATLTEITE
VNPLPPHYVCRKCKKSEFFDDGSVGSGFDLKDKDCPDCGIPYKKDGQDIPFETFLGFKGD
KVPDIDLNFSGEYQPQAHNYTKVLFGEDNVFRAGTIGTVAEKTAYGYVRGYANDRDMTMR
GAEIDRLVQGCSGVKRSTGQHPGGIIVVPDYMDIYDFSPIQFPADAQDSEWKTTHFDFHS
IHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFAGPESLGVTKEQIGCK
TGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNGTCQLSDV
IGCRDDIMVYLIYQGLESSLAFKIMESVRKGKGLTPEMEAAMKEKAVPNWYIESCKKIKY
MFPKAHAAAYVLMAVRIAYFKVHFPVLYYAAYFTVRAEDFDVNAMAKGSQSIRAKVDEIN
SRGLEASTKEKNLLTVMELALEMVERGYSFQKVDLYKSSADQFLIEGNTLIPPFNAIPGL
GTNAAKSIVAARAEGEFLSKEDLQQRGRVSKTIIEYMDDHGCLEGMPDANQLSLF
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgataaatgagcaagacgccaaaatgagatttaaattgctgctgcagcatctggagtta
accgacgatgtccatatgccatattttgaaggggcggaattgacacgcatgaccgttcat
aagaaagaccgggcatggcgttttatcgtcaaactcaagcaagtgctgccgcttgaatta
tttattattttccgcgagcggctgcaagccaagttttcatcgattgcaagcgttcaagtg
catatagaaacacccacgcaacaagcagaaggcgaacaagtcgcagcatactggcgacat
gtcgtcgacgaattggcggatatggcaccgccactacgcgagcgcctgctgtcacaagca
cctgtatggaatggcaataaattgatcgtcgactgctgccatgaacatgaaatgatggca
ttgaaatccaaatacactgataaattaagccaggttttccaacaattcggatttccggca
ttttcgatcgatttccagctatcggcagaagaccaacaggaagcgcgcgctgcctttatg
gaagagcgcaaagccgaagaagaagcgatggcgaaacgagctgtcgcagacatgaagaaa
cgggaaaccgagcgcaaagaaaatggcgcaccatccggtccattccagatgggatctgcc
atcaaaccggatgagccgatcgtcgagatccgttcgattgtcgacgaagaacgccgcgtg
accatcgaaggcttcgtttttgatgttgaagtccgcgagctgcgcagcggccgttcgcta
ttgaccgtcaagatgaccgattatacggattcgattctcgtcaaaatgttctcacgcgat
aaagaagacgcggagctcatggcccaagcgaaaaaaggcatgtggctgagagcaagaggc
tcgatccaaaccgatacattcgtcagggatctggtcatgatgtcgaatgatatggtcgaa
atcaatccgtccgtccgcaaagacacagctgaaaccaaacgcgcggaattgcacctccat
tctccgatgagccaaatggacgctgtttcttccattgaatcattggtcgcccaagcggca
aaatggggacatccggcgatcgcagtcacggaccacgcaggcgtccaggcctttccggat
gcttatgccgcaagccaaaagcacggcatcaaggcgatattcggcttggaagcgaactta
gtcgatgacggcgtcccgattgcctatgaagaacgccatgctttgcttgaggaagagact
tttgtcgtctttgacttagagacgactgggttatccgctgtttacgacacgatcatcgag
ctggcagcggtcaaaatcaagggcgggaatatcatcgataaattcgagcgattcgccaat
ccgcaccatcctttgtcggcgacgacgatcgacttgacgggcattacggatgatatggtc
cgaaacgcaccggaagtcgaagacgtcatccgcgaataccatgaatgggcaggcgatcat
atcatggtcgcgcataacgcctcgttcgatatgggcttcctctatgtcgcctataagaaa
tacggcatcgataaaacgcatgccacgattgatacgctagaacttgcccgcatgcttcac
ccggaaatgaaaaaccaccgtttgaacacgctggcgaagaaattcaatatcgaactgacg
cagcatcaccgcgccatctacgatacggaagcgaccgcttacctgttgacgcatctattg
aaagaagcggacgataaaggcatcctttaccacgatcaattgaatgattatgtcgggacg
ggggattcctataaacgctcacggccgactcattgcacacttttggcaaaagaccaggaa
ggcttgaaaaacctgttcaagctcgtttcagcctcccatatcaattatttctaccgtgtc
ccgcgcatcccgcgttcgcttttgcagcgccaccgaaaaggcttgctcgtcggttcgggc
tgcgataaaggcgaagtgttcgaagcggtcatgcagaaatcgatggaagaagtggaacgc
actgcacagttctatgattatttggaagtgcatccgaaagaagtgtaccagccattgatc
gaccgcgaattgatccgcgacgaatggaatctagaagacatcatccgcaagctggccaaa
gtgagccgcaagctcgataagccgctggtcgcgacaggaaatgtccattaccttgatgaa
acggatgccatcttccgtcaagtgctgatcggttcccaaggcggggcgaatccgctgaac
cgttcgaccttgccgaaagttcatttccggacgacgaatgaaatgctcgatgctttcgat
tttcttggggaagagacggctcgtgagattgtagtcgacaattccttaaagattgccgat
atgatcgatgtcgtcaaaccgatcaaagacgaattgtatacaccgaaaattgaaggagcg
gatgaggaagtccgtgaactcagctatacgatggcccgctcgatttacggagacgacttg
ccggaaatcgtcgaggcgcgcatcgagaaggaattgaagtcgatcatcggccatgggttt
gcggtcatctatttgatttcgcataaactggtaaaaaaatcgcttgatgacggctatctc
gttggttcccgggggtctgtcggatcgtcccttgtcgcgacgctgacggaaattacggaa
gtcaaccctttgccgcctcattatgtatgccggaaatgcaagaaatccgagttcttcgat
gacggctctgtcggttccggctttgacttgaaagataaggattgcccggattgcgggatt
ccgtataagaaagatggacaggacattccctttgaaaccttccttggatttaaaggagac
aaagttcccgatatcgatttgaacttcagtggcgaatatcagccgcaagcgcataattac
acgaaagtgctgttcggcgaagacaatgtcttccgggcaggcacgatcgggacggtagca
gaaaaaacagcctacgggtatgtgcgcggctacgccaatgaccgcgatatgacgatgcgc
ggcgcagagatcgaccgtttggtgcaaggctgttctggcgtcaagcgcagcacaggccag
cacccgggcggcatcatcgttgtgcccgattatatggacatctacgatttctcgccgatc
caatttccagcggatgcgcaagattccgaatggaagacgactcatttcgacttccactcg
atccacgataatttattgaagctcgatattctcgggcatgatgacccgacagtgatccgc
atgttgcaggatctgtccggcatcgacccgaagacgatcccgacagatgatccggaagtg
atgaagattttcgctggccccgaatcgctcggcgtcacgaaagagcagatcggctgtaaa
accggaacgctcggcatcccggagttcgggacgcgcttcgtccgccaaatgctcgaagat
acgaaaccgacgacgttctctgaactcgtgcagatttccggattgtcgcacggcacggat
gtttggctcggcaatgcccaggaattgatccacaacggcacttgccaactgtccgacgtc
atcggctgccgggatgacatcatggtctacttaatttatcaagggcttgagtcatctttg
gcgttcaagatcatggaatcggtacggaaagggaaaggcttgacgccggagatggaagcg
gcgatgaaagaaaaagccgtcccgaactggtatatcgaatcatgtaaaaagatcaagtac
atgttcccgaaagcgcacgccgccgcttacgtcttgatggcggtccgcatcgcttatttc
aaagttcatttcccggtcctttactacgccgcgtacttcacggtgcgtgcagaagatttc
gatgtcaacgccatggcgaaaggatcccagtcgatccgtgccaaagtggacgaaatcaac
tcaagaggactcgaagcttcgacgaaagaaaagaacttgctgacggtcatggaactggcg
cttgaaatggtcgaacgcggctattcattccagaaagtcgatttgtataaatcgtctgcg
gatcaattcctgattgaaggcaatacattgatcccaccgttcaatgccattccaggactc
ggcacgaatgccgcgaaatcgatcgtcgccgcaagagcggaaggcgaattcctgtcgaag
gaagatttgcagcagcgcggccgcgtttcaaaaacgatcatcgagtacatggatgaccat
ggctgcctggaagggatgcctgatgccaatcagctatccttgttctag
DBGET
integrated database retrieval system
