Planococcus sp. MB-3u-03: CW734_12355
Help
Entry
CW734_12355 CDS
T05387
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
plx
Planococcus sp. MB-3u-03
Brite
KEGG Orthology (KO) [BR:
plx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plx03400
]
CW734_12355 (addA)
Enzymes [BR:
plx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CW734_12355 (addA)
DNA repair and recombination proteins [BR:
plx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CW734_12355 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
CARD
ResIII
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AUD14282
LinkDB
All DBs
Position
complement(2204922..2208527)
Genome browser
AA seq
1201 aa
AA seq
DB search
MIPEKPNDATWTDEQWQAIWAKGQDMLVSAAAGSGKTAVLINRMIEKVLDEQDPISVDEL
LVVTFTNASAAEMRHRMSAALEQAVTAQPESVHLKKQLRLINKAQISTLHSFCLQVVKQY
AYLLEIDPGFRIAGDTEAALLRDDVMEAVLESAYEGEGREKVYRLADSFTSDRSDQAMEI
LLGKLYDYSRVHPEPEAWLEQLPKLYDVPEHATIDELPFMEDLKMTIRHSFEAALDLLDE
GWELATRPDGPDILEENFRMDATLIRAALDALDESWASLHAYARNIKWERLASVKKDSCD
PQLAEEAKARRNEAKKLFNDVKEGYFTRAPERLLEEMREMAPLMRTLVDLTKRFAEDYKA
LKIDRGLVDFSDLEHYALEILSDGGEASAIAQDYRTRFKEVLVDEYQDTNMLQETILSLV
KSGSEQDGNLFMVGDVKQSIYRFRLAEPMLFLGKYSRFSREAQGTGLRIDLNANFRSRKE
VLDGTNYIFSQIMGERVGEISYDEDAALKPKAPYPEGDVPIHLTLIHEPETEEGEEMPVD
MDKSQWEARWIAQKIRHMMDAGTLVHDPWSGKERPLEYRDIVVLMRSMTWSGDFSDEFKM
AGVPLYAELSGGYFDALEVMIMLNTLRVIDNPYQDIPLAAVLRAPFFGLQENELAAIRLA
DTKGTFYDALKAFIRIGTMDEATRIKLARFTNSLRTWRDLARRGSLSELIWKVYLDTNYY
EMAGAMSNGKQRQANLRALHDRALEYEKTAFRGLFRFLRFIDRMRERGDDLGTAKSLSEK
ENVVRLMTVHKSKGLEFPIVFFAGTGRPFNEMDFHKPYLFDQQYGLAVKAVNPDTRIEYT
SLPYLAVKEMKQLQMKAEEMRVLYVAMTRAKEKLYLTASIKDIDRLLEKWKTASGDVLLP
DFKRSRAKSYLDWIGPAVSRHPDAEELHVGGEVLEHHSRFQIDIVETVSLEEPQPLLEAE
KDRPEAEADAELIRSRFDFTYPHQAAVEKRSKQSVTEMKRLQLLQRSDEPESFIQNYQPK
AQKKAPHRPDFLMDRKLSAADIGTAVHTVMQHLPLDRQMDVEEIRQFLDELTGREILTKE
EAQAVKAEQVEAFFHSTIAQRLMNAEDVRREVPFTYARADEDGDHQIVQGIVDCLFKEDG
EWILLDYKTDQTRGMANVQSAMKERYSIQLSVYQEAVEAILRIAIKQRVLYLFSTNEEVE
V
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atgataccggaaaaaccgaatgatgccacatggaccgatgaacaatggcaggcgatatgg
gcgaagggacaggatatgctcgtatcggctgcggccggttccgggaaaacggctgtcctg
atcaaccggatgatcgaaaaagtgctcgatgaacaagatccgatatccgtcgatgagcta
ttggtcgtcaccttcacgaacgcatcggcagcggaaatgcgccaccgcatgtctgcagct
ttagagcaggcagttacagcgcagccagaatccgttcatttaaaaaaacaattacggctg
atcaataaagcacaaatttcgactttgcattcgttctgcctgcaagtcgtgaagcaatac
gcctatctgttggaaatcgatcctggcttccgcatcgcgggagatacggaagcggccttg
cttcgtgatgatgtcatggaagcggtgctcgaatccgcttatgaaggcgaagggcgcgag
aaggtctacaggctcgcagacagttttacttctgaccgcagcgaccaggcaatggaaatc
ctgctgggtaaattatatgattattcacgtgtgcatcctgaaccggaagcatggcttgaa
caattgccgaagctatacgatgtaccggaacatgccacaattgatgagttgccgttcatg
gaagatctgaagatgacgatacgtcatagtttcgaagcggcgcttgacttgcttgatgaa
gggtgggagttggccacccgtccggacggccccgacatactggaagagaatttccggatg
gacgccacgctgatccgtgccgcactcgatgcattggatgaatcttgggcatcgcttcat
gcttatgcacgaaacattaaatgggagcgtttggcatccgtgaaaaaagattcctgtgac
ccgcagttggcagaagaagcgaaagcacggagaaatgaagcgaaaaaactgttcaatgac
gtgaaagaggggtatttcacccgcgcccccgagcgtctgcttgaggaaatgcgcgaaatg
gcgccactcatgaggacattggtcgatttgacaaagcgctttgcagaagattacaaagcc
cttaaaatcgaccgcggtttggtggatttctcggatttggagcattatgcactggaaatc
ctgagcgatggcggggaagcttccgcgatagcacaggattaccgaacacgcttcaaggaa
gtcttggtcgatgaataccaagatacgaatatgctgcaggaaacgatcctcagccttgta
aagtcgggatctgaacaagacggcaatttattcatggtgggggatgtgaaacagtccatc
taccgcttccgtctggcggagccgatgctgttcttaggcaagtattcccgctttagccgt
gaagctcaaggaacgggcctgcgaatcgatttgaatgccaatttcaggagccgaaaagaa
gtgctcgatggaaccaattacatcttttcgcagatcatgggcgagcgcgtcggtgaaatc
agctacgatgaagatgcggcattgaagccgaaagcgccatatccggaaggggatgtgcca
atccatttgacgctcatccatgaaccggaaacggaagaaggggaagaaatgcccgttgat
atggacaagtcgcaatgggaagctcgttggattgcgcaaaagatccgccatatgatggat
gcgggaaccctcgttcacgatccatggagcggaaaagagcgtccgcttgaataccgcgac
attgtcgtattgatgcgttcgatgacttggtcgggtgacttttccgatgaattcaaaatg
gctggtgttccgctttatgcggagttgagcggcgggtatttcgatgctctcgaagtgatg
atcatgctcaatacattgcgcgtcatcgataatccgtaccaggatattccgcttgccgcc
gttctccgggcgccgtttttcggccttcaggaaaatgaattggcagcgatccgccttgcc
gatacgaaaggcactttttacgatgcattgaaagcgtttatccgcatcggtaccatggat
gaagccactcgcattaagctggcccgtttcacgaacagcctccgcacttggcgggatttg
gcgcgcaggggctcgttgtcggagttgatttggaaagtgtacctggatacgaattactat
gagatggcgggtgctatgtcgaacggcaagcagcgccaagcaaatctgcgtgccctgcat
gaccgtgcgctcgaatacgaaaaaaccgcttttcgcggattgttccggttcctgcgcttt
atcgaccgcatgagggaacgcggggatgatcttgggacggcaaaatcattgagcgaaaag
gaaaatgtcgtgcggctcatgaccgtccataaatcgaaaggcttggaatttccgatcgtc
tttttcgcagggacaggaaggccattcaatgaaatggatttccacaaaccgtatttattc
gaccagcaatatgggcttgcggtcaaggcagtcaatcccgatacacgcatcgaatatacc
tcactgccttatctcgccgttaaagagatgaagcaattgcagatgaaggctgaagaaatg
cgggtcttgtatgtagcgatgacgcgtgcgaaagaaaagctctacttaactgcctctata
aaagacatcgaccgcttactggagaagtggaagaccgcctcgggcgacgtgctgttgcct
gactttaaacgttcgcgtgcaaaatcttatttggattggatcggcccagccgtgtccagg
catcccgatgccgaagaactgcatgtaggcggtgaagtgctcgagcatcattcacgcttt
cagatcgatattgtcgagaccgtttccttggaagagccgcagcctttgctcgaagcggaa
aaagacaggccggaagcagaagcagatgcagaactgattcgcagccgtttcgattttacc
tatccccatcaggcagctgtcgaaaaacgttccaagcaatcggtgacggaaatgaagagg
ctgcagttattgcagcgttcggatgagccggaatcgttcatccagaactatcaaccgaaa
gcacaaaagaaagcgccgcatcgcccggatttcctgatggaccgcaaactgtcagctgca
gatatcggtacggcagtgcataccgtcatgcagcatttgccacttgatcggcagatggat
gtagaggagatccgtcaatttctcgacgagttgacaggacgggaaattcttacgaaggaa
gaagcgcaggctgtcaaagctgaacaagtcgaagcttttttccatagtacgattgcacag
cgcctgatgaacgccgaggatgtcagacgggaagttcctttcacgtatgcacgtgctgat
gaagacggcgaccatcagatcgtccaagggatcgtcgattgcctgttcaaggaagacggg
gaatggatcctgctcgattataaaacggatcaaacccgcgggatggccaatgtccaatcg
gccatgaaagagcgctattccatccaattatcggtttaccaagaagcggtggaagcgatt
ttgcgcattgcgataaaacagcgtgtcttgtatttattctcgacaaatgaagaagtggaa
gtctag
DBGET
integrated database retrieval system
