Planococcus sp. MB-3u-03: CW734_12360
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Entry
CW734_12360 CDS
T05387
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
plx
Planococcus sp. MB-3u-03
Brite
KEGG Orthology (KO) [BR:
plx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plx03400
]
CW734_12360 (addB)
Enzymes [BR:
plx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CW734_12360 (addB)
DNA repair and recombination proteins [BR:
plx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CW734_12360 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_16
AAA_19
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AUD14283
LinkDB
All DBs
Position
complement(2208505..2211981)
Genome browser
AA seq
1158 aa
AA seq
DB search
MSLRIVYGRAGTGKTRFVQEEIADSLKDQADGDPIFLIVPDQMSFSTEYRLSAAYGMNGM
IRAQAVTFKRLAWRVLQEVGGISRKEIDTFGYRMLIRSLLEEHKEEFNLFRRAAGKRGFT
DQIEQLIKEFSRYCIDCDELGTIRSSLETAGAPRTLQDKAADLELILLEIDRRLGKVFVD
SEGHLGLLSEKIRHSETIKHSAIYIDGFVSFTAREFQIIEELLKHAKSVTIVLPMDDTSS
TEDEQSLFYQSAVTASRLTDLAASEGIGLEPEVYLQEPKRFMNEELLHIERFIETFPAPS
IEGQGAVELVEASNRRAEIHELARSIRQQVMDGCRYNDIAVLYRQPEVYDELINTIFPQY
DIPYFISQKKSMLHHPLIEFSRSALEAVIGNYAYEPVFRALKTDLFFPEGNVSKWRERGD
QLENFVLANGIYGDRWFDDKRWIYKKYRGLEFHSGIQTDEELALQMELQTVRDVVRDPLE
RLKTRLGDCVTGRDFATALFQFIEELDVYSKIQLLKDREEADHQLLAATEHEQAWNQWVG
VLDQFVLMFGDKELDMQSAARILDEGFETLEFSRIPPSLDQVTIAKMDLARLMDIRSVFI
IGANDGVLPQRIEHEGLLTDAEREWFQKIGIELAPSSRMRLMDETYMAYRSFSSASDRLS
VSYPIADEEGKALLPSLYIRKIADLLQLEPKLAAIGPEELHEPDPLEYISHPRATLSHLA
AQIRSGELTGQWQAVLDYYREDPLWSAIIHQVFKPLSHGKAEKLSEEIAESLYGAPIASS
VSRIETYHSCQFAHYAAYGLKLEERSQYRLAAPAMGDLFHAAIKWISDEVMQLGVSWSSL
SKEQCADLAKRAIEQLSPYFVNQILLSSHRYRYIQYKLEGIIRQTAFMLSKHAQVSGFVP
VALEVGFGTKEAIPPLDIPLERGRKMNVRGRIDRIDSTDIGGKPYLRVVDYKSSKQGLDL
GEVYHGLALQTFTYLDVALTHSKRWLGEQAEPAGVLYFHMHNPMLKMTKLLTAEELEEEL
AKSFKMNGLVVEDPEVIQAMDDQIDGYSNVIPVRLYKNGSVSKGSSKTVEKDDMETIRKF
VRKKHQGAGNGILDGNTAVSPYRLKDDTPCQFCNFRAVCQFDPSDPDQSYRKLPVLSPDQ
AVEKIRKELSADDTGKTE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtctttacgaattgtctacgggcgcgccggtaccggaaaaacccgttttgtccaagaa
gaaatcgccgatagtttgaaagaccaagcggatggggatccgatatttctgatcgtcccg
gaccagatgtctttttctacggagtatcgtttgtccgccgcatacggcatgaacggcatg
atccgtgcgcaggccgtgactttcaagcgtcttgcctggcgtgtattacaggaagtcggc
gggatcagccgcaaggaaatcgacacattcggctatcgcatgctgatccgcagcttgctt
gaagaacataaagaggagtttaatttattcagaagagctgcaggcaaacggggcttcacc
gaccaaatcgagcaattgatcaaagagttttcacgttattgcatcgattgcgatgaactc
ggcaccatccggtcatcccttgaaacagccggagccccgaggacgctgcaggacaaggca
gcagatctcgaactcatcttgctggaaatcgaccgcaggcttggcaaagtgttcgtggat
tccgaaggccatctcggcttattgagcgagaagatccgccattcggaaacgatcaagcat
tcggctatttatatcgatgggttcgtcagttttacagcgcgcgagttccaaatcattgaa
gagttgttgaagcatgccaaatcggtgacgatcgtcttgccgatggatgacacaagcagt
acggaggatgaacagtcgttattctaccaatctgccgtcactgcaagccggcttacggat
cttgccgcatcggaaggaatcgggctagaaccggaagtgtatttgcaagagccaaaacgt
ttcatgaacgaggaacttctgcatatcgaacgcttcatcgaaacgttccctgccccatcc
atcgaagggcaaggagccgtcgaattggtcgaagcgtccaaccggcgcgctgaaatccat
gagctcgcccgctcgatccggcagcaggtgatggatggctgccgctataacgatatagcg
gtgctgtaccgccagccggaagtgtacgacgaattgatcaacaccatttttccgcaatac
gatatcccttactttatcagccaaaaaaaatcgatgcttcatcatccattgatcgaattc
agccgctctgcactcgaagcggtcatcggcaattatgcatatgaaccggttttccgggca
ttgaagacggatttgttcttccctgaaggcaatgtcagcaaatggcgggagcggggagac
caattggagaatttcgtccttgccaatggcatctacggagaccgctggtttgatgacaag
cgctggatctataaaaaataccgcgggctcgaatttcattcaggtatccagacagacgaa
gaattggcgctccagatggaattgcagactgtccgggatgtggtgcgcgacccgcttgag
cgtttgaaaacccgccttggcgactgcgtcaccggccgggactttgctacagcgctgttt
cagtttatcgaagagcttgatgtctattcgaaaatccagctgctgaaagaccgcgaagaa
gccgaccatcaattgcttgccgcgacggagcacgagcaggcatggaatcaatgggtcggc
gtgctcgaccaattcgtcctgatgttcggggacaaagaactggatatgcaaagtgcagca
cggattctcgatgaaggctttgaaactttggagttttcacgcatcccgccgtcgctcgat
caagtgaccatcgcgaaaatggacctggcgcgcttgatggacatccggtcggtcttcatc
atcggcgcaaatgacggcgtcttgccgcaacgcatcgaacacgaagggctcttgacggat
gcagagcgtgagtggttccaaaaaatcggtatcgaacttgcaccgagctcccgcatgcgc
ttgatggatgaaacttatatggcatatcgctcgttctcttccgcttccgatcggctaagc
gtctcttacccgattgcggacgaagaagggaaggccttattgccttctttatatatcagg
aaaatcgccgatttgcttcagcttgagcccaaattggcagcaatcggccctgaagagctg
catgagccggatcctttggaatacattagccatccgcgtgcaacactttcgcatctggct
gcccaaatcaggagcggggagcttaccggacagtggcaggccgtgctcgattattaccgg
gaagacccgttgtggtcggcgattatccatcaggtgttcaagcctttgagccatggcaaa
gctgaaaagctatcggaagagatcgctgaatcgctttatggtgcaccgatcgcttcgagc
gtatcccgcatcgagacctatcatagctgccaatttgcccattatgcagcttacggcttg
aaacttgaagaacgcagccaataccgtctggctgcgccggcaatgggagatttattccat
gccgcaatcaaatggatttccgatgaagtgatgcaactcggcgtttcctggtcgtcgtta
agcaaagaacaatgcgcggatctcgccaagcgggcgattgaacaattatcgccttatttt
gtcaaccagatcctgttgagttcgcatcgctatcgctatatccagtacaaacttgaaggc
atcatccgccaaacagctttcatgttgagcaagcatgcacaagtatccggcttcgtgccg
gtcgcgcttgaagtaggcttcggcacgaaagaagcgattccgccgctcgacattccgctc
gaacgtgggcgcaagatgaatgtcagggggcgtattgaccgcatcgactcgaccgatatc
ggcggcaagccgtatttgcgggtcgtcgattataaatcatccaagcagggcctggatctc
ggcgaagtgtaccatggcctggccctgcaaacttttacttatttggatgtggccttgacc
cattcgaagcgctggcttggggagcaggcggaaccggcaggggtgctgtatttccatatg
cataacccaatgttgaaaatgacgaaattattaactgctgaagagctggaagaggaactt
gcgaagtcatttaaaatgaacggtttggtggtagaagatccggaagtcatacaggcgatg
gacgatcagatcgacgggtattcgaatgttattccagtgcgcctctataaaaacggctcg
gtctcgaaaggctcatcgaaaacagttgaaaaagatgatatggaaacgatccgcaaattt
gtccggaaaaaacaccaaggggcagggaatggcattcttgacggcaatacagccgtttcg
ccctaccgcttgaaagatgacacgccttgccaattctgcaatttccgcgcggtttgtcaa
ttcgacccgagtgaccccgaccagagctaccggaaattgccggtattgagccccgaccag
gcagtggagaaaatacgcaaggagttgagcgctgatgataccggaaaaaccgaatga
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