Planococcus sp. MB-3u-03: CW734_14540
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Entry
CW734_14540 CDS
T05387
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
plx
Planococcus sp. MB-3u-03
Pathway
plx03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CW734_14540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plx03400
]
CW734_14540
Enzymes [BR:
plx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CW734_14540
DNA repair and recombination proteins [BR:
plx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CW734_14540
Prokaryotic type
CW734_14540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF1643
Motif
Other DBs
NCBI-ProteinID:
AUD14656
LinkDB
All DBs
Position
complement(2652083..2652757)
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AA seq
224 aa
AA seq
DB search
MTKQIFSNDWQEILGEEFGKSYYRELREFLKEEYANETIYPVKENIWNAFEHTAYEDVKA
VILGQDPYHGPNQAHGLSFSVQPGIAHPPSLRNIFKELEDDIGCEKPVDGTLTKWSDQGV
LMLNTVLTVRQGQAHSHQKKGWEQFTDEVIRKLSEREAPVIFILWGKPAQMKKRLIDTER
HDIIEAPHPSPLSAHRGFFGSKPFSKVNKLLQSRGEEPIDFCLD
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcaaattttcagcaatgactggcaggaaatcttaggagaagaattcggcaaa
agttattacagagagttgagggagttcttaaaagaagaatatgccaatgaaaccatatat
ccggtaaaagagaatatttggaatgcctttgaacatacggcttatgaagatgtcaaagca
gtcatcctcgggcaagacccctaccatgggccgaatcaagcgcacggcttgagcttttcc
gttcagccaggcatcgcacatccgccgagcctgcgtaatatcttcaaagaactcgaagac
gacattggctgtgaaaagccggtggatgggactttgacgaaatggtctgaccaaggggtg
ctcatgctcaacaccgtcttgacggtaaggcaagggcaagcgcattcgcaccagaaaaaa
ggatgggagcagtttacggatgaagttatccggaaattatcggaacgtgaagcgccggtt
atcttcattttatggggcaaaccggcgcagatgaaaaaacgcctgatcgataccgaacgc
cacgacatcatcgaagccccgcatccgagcccactcagtgcacatcgtggatttttcggc
agtaagccgttctcaaaagtgaacaagctgttacaatcgcgcggtgaagaaccgattgat
ttctgcctggactga
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