Paenibacillus lycopersici: GXP70_01725
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Entry
GXP70_01725 CDS
T07013
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21701
AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
Organism
plyc
Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plyc03000
]
GXP70_01725
Transcription factors [BR:
plyc03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GXP70_01725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Peripla_BP_2
Cupin_2
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QHT58824
UniProt:
A0A6C0FU25
LinkDB
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Position
379043..380884
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AA seq
613 aa
AA seq
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MFLKKQIIRKRGGVYVYYRIVSAYRDENGRVKHRIEKHLGALTDAEADRIRAVLRAGEYP
GPSPAAQQGAPAEGLSATALPAFAFLGMHRLVHAPGSPSEWNVTDADMILLVRGGRGELQ
LGWRAYALEAGAAFYWTAGTGMHVANPYDEPLLLDRISFASFAQADSMNAGAGYARIAGP
YWTEGEIPAASPGRIGRLADELRSATEPGVHACEPLRVQLACCQLLASLFQPRPAAGEAP
GSGWIGTAIRHVHDHYGLDVTRDRLAATIGVSPAHFSRAFRRETGLGFVDYLRRVRIWRA
QELLQLAPRKQIGEIAGLCGFRSEPYFSRKFKQLTGHAPSAYRDSPKSYISLSGHITSNL
LTLGIVPAAGALELWMRGHYEARGDLSGMRTIGEFEAFEPPAVRDSEGRTPDLILARPAD
KQELERLRRYGPVFRLPDTDDGWRESFFLLADAVNRRAEAEAWVRRFDARAAACREALAP
LLARKETATILKIVSERLYVYGRTTSMSGFVLYDALGLRPPEAVMRELIDRKAPNKPIAP
EELPRFAADRIFVFDYRTQWYPDGYAWMRSDAWLGLDAVRNGRVYMPDPKIFYGCDALSL
EVQLEEAFRLLRS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttcttaaagaaacagatcatccgcaagcgcggcggcgtctatgtctactatcgcatc
gtttcggcgtaccgggacgagaacggccgcgtgaagcatcggatcgagaagcatctcggc
gcgctgaccgacgcggaagccgatcggatccgggcggtgctgcgcgccggcgaatatccc
ggcccctcgcccgcggcgcagcaaggcgcgcctgcggagggattgtccgcgacggcgctt
cccgccttcgcgttcctggggatgcatcggctcgtgcatgcgcccggctcgccgagcgaa
tggaacgtgacggatgccgatatgatcctgctcgtgcgcggggggcgcggcgagctgcag
ctgggatggcgcgcgtatgcgcttgaggccggcgccgctttctactggacggccgggacc
ggcatgcatgtcgccaatccgtacgacgagccgctgctgctcgaccggatctcgttcgcg
tcgttcgcgcaggcggacagcatgaacgccggcgccggttatgcccggattgccggtccg
tattggacggaaggcgagatcccggcagcctcgccgggccgcatcggacggctggccgac
gagcttcgctcggcgacggagccgggcgtgcatgcctgcgagccgctgcgggtgcagctg
gcatgctgccagctgctggcctcgctcttccagccgagaccggcggcgggcgaagcgcca
ggttcgggctggatcgggacggccatccgccacgtacacgaccattatgggcttgacgtg
acgcgcgatcggctggcggcgacgatcggcgtcagcccggcgcacttctcccgcgcgttc
cggcgcgagacggggctcggcttcgtcgattatttgcgccgggtgcggatatggcgggcg
caggagctgctgcagcttgccccgcgcaagcagatcggcgaaatcgccgggctgtgcggc
ttccgcagcgagccctatttcagccgcaaattcaaacagctcaccggccacgcgccttcc
gcataccgcgacagccccaagtcgtatatttcgctctccggccacattacgtcgaatttg
ctgacgcttggcatcgtgccggcggccggcgcgctcgagttgtggatgcgcggccattac
gaagcccgcggggatctgtcggggatgcgaacgatcggagagttcgaggcgttcgagccg
ccggcggttcgcgattcggaaggaaggacgccggatctcattctggcgcgtccggcggac
aagcaggagctcgagcggctgcggcgttacgggccggtgttccgcctgccggatacggac
gacggctggcgcgagtcgttcttcctgctggcggacgccgtcaaccggcgcgccgaggcg
gaagcgtgggtgcgccggttcgatgcgcgcgccgcggcgtgccgggaagcgctcgctccc
ttgcttgcgcgcaaggagacggcgacgattctcaagatcgtctccgaacggctgtacgtc
tacggccgcacgaccagcatgagcggcttcgtgctgtacgacgcgctcggattgcgtccg
ccggaagcggtcatgcgcgagctgatcgaccgcaaggcgccgaataagccgatcgcgccg
gaagagctgccccgcttcgccgccgaccgcatcttcgtgttcgattaccggacgcagtgg
tatccggacggctatgcatggatgcgctccgacgcatggcttgggcttgatgcggtccgg
aacgggagggtatacatgccggatccgaaaattttctacggctgcgatgccctctcgctc
gaagtccagctggaggaggccttccggctgctgagatcataa
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