KEGG   Paenibacillus lycopersici: GXP70_01875
Entry
GXP70_01875       CDS       T07013                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
plyc  Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:plyc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plyc03400]
    GXP70_01875
Enzymes [BR:plyc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GXP70_01875
    5.6.2.6  RNA 3'-5' helicase
     GXP70_01875
DNA repair and recombination proteins [BR:plyc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GXP70_01875
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr WH4_Lhr Helicase_C WH3_Lhr
Other DBs
NCBI-ProteinID: QHT63696
UniProt: A0A6C0G7I6
LinkDB
Position
complement(411866..416083)
AA seq 1405 aa
MNEETALQDVSLDSAARGTGAMSGEKTSSGLTRAETGMRDGEQDDAAREAADMRSAAGVI
HPLGYKPRPVAIVESAMVKSIQVRVTMPDLSQPVRSRDGIWQPIVERIASLMEGMRSVLL
FVNSRRLCERLVLRLNEHAGRELARAHHGSLARERRLEVERMLKAGELRCLVATSSLELG
IDVGHVDLVIQVDSPKAAAAGIQRIGRAGHGVGDVSRGYILARQRSELPEAAVLCRNITR
RDIEAIELPHEPLDVLSQHIVSMTAAAETTAEALYGLIVQSECYRTFPRERLVSALKVLA
GFYPFARPLVDWDSDTDRLRKRANTAMASVTGAGTIPSTSNYPVHHADSRVHLGELDEEY
ITESRPGDVFQLGTSSWMISRIENDRVYVQEAPNRFSEIPFWKAEASSRSVEVGVQLGAF
LERLADRLGPALPSEEPDPASGMNMEREREEAAIAWLDTEYGLDHASAGQLIDLARAQQR
TVGLPTARRIVIEHYRDLSNQTRIIIHNPLGRRLNRTWLLAIQRHFQRLLPYSMYGNAKD
NGIELVVPEWDASWLQTLWQITAASAEPLLTEAITGSPLLAVAFRRIAETSLLLSRSFTR
TPIWLKRLRSEELLKQALPYAAHFPYLEEAMRECLHHYLDTNGLVRLLASIAAGDVAVSV
KEVNAPSPFAVHYISDYATAMVYEGDGLSEATQLQLLSVSKSLAGELFGQDAVRQAVDPA
VAREEEARLEAVRQPPASADELFGLLKRRGDLSREELAAAAGRDADAWLAALGSTGRTLE
LDFGRGQRRWICAEERELYAAFPQSEASIAFVAGRFADHRLSFTEAELRERYPLLSAEDA
ARVADTLLALDRTEHAPFADDAERIWTSRSVARRLIRLTLEQARKQAEAIDPVDWMAHMS
RLQHALSGTQLSGIDGLRLVIERLQGFFLPASHWETLIFPARVTGYRKDDLDLLCASGEV
IWLGRKADGEKEGRIAFFLAEAKPLYAPVMRQADRPDEASKHPELLRLLRTGGASFLTKL
SREYGKVPSELLADLLDLVWEGAVSNDQFAPLRLQLATKGKQLARTGSGLGRWYWTGSLA
DAAEEAEAEPGRLGGMSGPGGLDGINNPGGKADAAAGFGRADAVTGGSPLGTAASANGLP
APGGSPHGAERADAGGTYSLASDGGDGMAARELGAEALRAVSSDLSESALHWTQHLLDSC
GIVSKELVQQLSPFAWDELMPVLKQLEQWGVVTRGLLVEGAGSLQFARRAGLDAARLPPP
EQDGAAITMLAATDPANPFGLAADWPAARGSGFARKSGSFLVLQRGEWRYWLESNGKHII
ELTAGPEPPDELPAGASASRRQEEETAAALREVFRTLLRQQKLSKIKIERWNGVPVAESP
ASGMLRALGAERDGRSLVIWPSGLR
NT seq 4218 nt   +upstreamnt  +downstreamnt
atgaacgaagagacggcattgcaagacgtttcactggacagtgctgcccgtggaaccggc
gcgatgagcggcgagaagacaagctccggcttgacgcgggcggagacgggcatgcgggac
ggtgagcaggatgacgctgcacgcgaggccgccgacatgcggtccgcggccggggttatc
catccgcttggctacaagccgcggccggtcgccatcgtggagagcgcgatggtcaagtcc
attcaggtgcgcgtcacgatgcccgacctgagccagcccgtgcgctcccgcgacggcatc
tggcagccgatcgtcgagcgcatcgcctcgctgatggagggcatgcgctccgtgctgctg
ttcgtgaacagccgccggctgtgcgagcggctcgtgctgcgcctgaacgagcatgccggc
cgcgagctggcccgcgcccaccacggcagccttgcccgcgagcggcggctcgaggtcgag
cgcatgctgaaagccggcgagctgcgctgtctcgtcgccacctcgtcgctcgagctcggc
atcgacgtcggccacgtcgacctcgtcattcaggtcgactcgcccaaagccgccgccgcg
ggcatccagcgcatcggccgggcgggccacggcgtcggcgacgtcagccgcggctatatc
ctcgcgcggcagcgcagcgagctgccggaagcggccgtgctatgccgcaatattacgcgc
cgcgacattgaagcgatcgagctcccgcacgaaccgcttgacgtgctgtcgcagcatatc
gtctccatgaccgcggcggccgagacgacggcggaggcgctgtacggcctcatcgtgcag
agcgaatgctaccgcacgttcccccgggaacggctcgtatcggcgctgaaggtgctggcc
ggcttctacccgtttgcccgcccgctcgtcgactgggacagcgacacggacaggctgcgc
aagcgcgccaatacggcgatggcttccgtgaccggggccggcacgattccgtccacctcc
aattacccggtccatcatgccgacagccgcgtccacctcggcgaactggacgaagaatac
atcacggaaagccgccccggcgacgtgttccagcttggaacgagctcgtggatgatcagc
cggatcgagaacgaccgcgtgtacgtgcaggaagcgccgaaccggttcagcgagatcccg
ttctggaaagccgaggcgagcagccggagcgtggaagtcggcgtccagctcggcgccttc
ctggagcggctggccgaccggctcgggccggcgctcccgtcggaggagccggaccccgcg
tccggcatgaacatggagcgcgaacgcgaagaagccgccatcgcctggctggataccgag
tacgggctcgatcacgcttccgccgggcagctgatcgacctggcgcgggcgcagcagcgg
acggtcggtctgccgaccgcgcgccggatcgtgatcgagcattaccgcgacctgtccaac
cagacgcgcatcatcattcacaatccgctcgggcggcgtttgaaccggacatggctgttg
gcgatccagcggcattttcagcggctgctgccctattcgatgtacggcaacgccaaggac
aacggcatcgagctcgtcgtgccggagtgggacgcctcctggctgcagacgctgtggcaa
attaccgcggccagcgcggagccgctgctgacggaggcgatcacgggctcgcccctgctc
gccgtcgcgttccgccggatcgcggaaacctcgctcctgctctcgcgcagcttcacgcgc
acgccgatctggctgaagcggctgcggagcgaggagctgctgaagcaggcgctgccgtat
gcggcgcattttccgtatttggaagaagccatgcgggaatgcctgcatcactacctggac
acgaacggactcgtccggctgctggcgtccatcgccgcgggcgatgtcgccgtgtcggtc
aaggaagtgaacgcgccttcgccgttcgccgtccattacatctcggattacgcgacggcg
atggtatacgagggcgacggattaagcgaagcgacgcagctgcagctgctcagcgtcagc
aagtcgctggccggagaattgttcggccaggacgcggtacggcaggcggtcgatcccgcc
gtcgcccgcgaggaggaggcgcggctggaggcggtgcgccagccgccggccagcgcggac
gagctgttcgggctgctcaagcggcgcggcgatctgtcgcgcgaagagctggccgcggcg
gcaggccgcgatgcggacgcctggctggcggcgctcggctccaccgggcggacgctcgag
ctcgacttcggacgcgggcagcggcgctggatctgcgcggaagagcgcgagctgtacgcg
gccttcccgcagagcgaggcttcgatcgcgttcgtcgccggccgcttcgcggatcatcgg
ctctccttcaccgaagcagagctgcgggagcgctacccgctgctctccgccgaggacgcc
gctcgcgtcgcggatacgctgctcgcgctggaccgcacggagcacgcgccgttcgcggac
gacgcggagcggatctggacgagccgcagcgtcgcgcgccggctcatccggctgacgctg
gagcaggcgcggaaacaggcggaagcgatcgatcccgtggactggatggcgcatatgtcg
cggctgcagcatgcgctgtcggggacgcagctgagcggcatcgacggcttgcggctcgtc
atcgagcggctgcagggcttcttcctgccggcctcgcattgggaaacgctcatcttcccc
gcgcgggtgacgggttaccgcaaagatgacctcgacctgctctgcgcctccggcgaggtc
atctggctcggccgcaaagcggacggcgagaaggaagggcggatcgccttcttcctcgcg
gaagcgaagccgctctacgcgccggtcatgcggcaggccgaccggccggacgaggcgtcg
aagcatccggagctgcttcggctgctccggacgggcggcgcgagcttcctgacgaagctg
agccgcgaatacggcaaagtcccgtcggagctgctggccgacctgctcgacctcgtctgg
gaaggcgccgtctccaacgaccagttcgcgccgctgcgcctgcagctcgcgaccaagggc
aagcagctcgcccggacgggctccggtctcgggcgctggtattggacgggatcgctggcg
gatgccgccgaggaggccgaagccgagccgggccgcttgggcggcatgagcgggccgggc
gggctggacggcatcaacaatccgggcggcaaggcagatgccgccgccggcttcgggcgg
gcggacgccgtgacgggcggcagtccgctcggcacggcggcatcggcgaacgggctgccc
gccccgggcggaagcccgcacggcgcagagcgggcggacgccggcggcacgtactcgctg
gcgagcgacggcggcgacggcatggcggctcgcgagctcggcgccgaagcgctgcgcgcc
gtcagctccgacctgtcggagtcggcgctccactggacgcagcatctgctcgacagctgc
ggcatcgtgtccaaggagctcgtgcagcagctgtcgcctttcgcctgggacgagctgatg
ccggtgctgaagcagctcgagcagtggggcgtcgtgacgcgcggcctgctcgtggaaggc
gcgggctcgctgcaattcgcgagacgcgcgggcctcgacgcggcgcgccttccgccgccg
gagcaggatggcgccgccatcacgatgcttgcggcgacggacccggcgaacccgttcggg
ctggccgcggactggcccgccgcgcgcggctccggcttcgctcgcaagagcggcagcttc
ctcgtgctgcagcggggcgaatggcgttactggctggagagcaacggcaagcatatcatc
gaattgacggccgggccggagccgccggacgagcttccggccggggcttccgcaagccga
cgacaggaagaggaaacggccgcggccctgagagaggtattccgcacgctgctgcgccaa
cagaagctgagcaagatcaagatcgagcgctggaacggcgtgcccgttgcggaatcgccg
gcatccggcatgctgcgggcgctgggcgcggagcgcgatggccgctcgctcgtcatctgg
ccgagcggcctgcggtag

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