Paenibacillus lycopersici: GXP70_10250
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Entry
GXP70_10250 CDS
T07013
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
plyc
Paenibacillus lycopersici
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plyc03400
]
GXP70_10250
DNA repair and recombination proteins [BR:
plyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GXP70_10250
Archaeal homologous recombinant proteins
GXP70_10250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QHT60283
UniProt:
A0A6C0FXR5
LinkDB
All DBs
Position
2370984..2372213
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AA seq
409 aa
AA seq
DB search
MRILHTADWHFGRTLEGRGRLEEQAAFVDELASIADDERIDLILLAGDVYDSVNPPAAAE
SLFYDAVARLADGGKRTIAVIAGNHDHPDRVSASAPLAARSGIRLVGMPTDKPLVVGVPR
TGEQAVIAALPYPSESRLRELLSEATDEGRLRSAYSERVGRLMAQLGTAFRSDTVNLAMS
HIYVLGGLETDSERPIQIGGAYTVDPSALRIGAQYVALGHLHRPQRVAGDETMRYSGSPL
AYSFSEANYVKAVTVFDAAPGQPVVPQQIHLGSGRPLVQWTAKGGVAEVQRWLEEGRDAR
AWIDLNIHMSEAMTLQQIQQLRRQHDGFVHIRPVYPEMEELIGQDARSREQLPAEELFRR
FFSRQTGGGEPDAETVRLFLELIAEEDESAAAEDGTEEGTEAQAGGEGA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatattgcacacggccgactggcacttcggacgcacgctggagggccgcggccgt
ctggaggaacaggccgctttcgtcgacgagctcgcgtcgatcgccgatgacgagcgcatc
gacctcatcctgctcgcgggcgacgtgtacgattccgtcaatccgccggcggcggcggaa
tcgctgttctacgacgccgtagcgcggctggcggacggcgggaaacggacgatcgccgtc
atcgccggcaatcacgaccatcccgaccgcgtgtcggcgtccgcgccgcttgccgcgcgc
agcggcatccggctcgtcgggatgccgacggacaagccgctcgtcgtcggcgtgccgcgc
acgggcgagcaggcggtcatcgccgcgctgccgtatccgtcggaatcgcggctgcgcgag
ctgctgagcgaggcgacggacgaaggccggcttcgcagcgcctactcggagcgtgtcgga
cggctgatggcgcagctggggacggctttccggagcgacaccgtcaatctggcgatgagc
catatttacgtgctcgggggactcgagacggattcggagcggccgattcagatcggcggc
gcctatacggtcgatccgtcggccttgcggatcggcgcgcagtacgtggcgctcggccac
ctgcaccgcccgcagcgcgtcgccggcgacgagacgatgcgctacagcggctcgccgctc
gcctacagcttctcggaagcgaattacgtcaaggcggttaccgtcttcgacgcggcgccg
ggccagcctgtcgtaccgcagcagattcacctgggctcggggcggccgctcgttcagtgg
actgccaagggcggcgtcgccgaagtgcagcgctggctggaagaaggccgcgacgctcgg
gcgtggatcgaccttaatatccatatgtccgaggcgatgacgctccagcagattcagcag
ctgcgccgccagcatgacgggttcgtgcatattcgtcccgtctatcccgagatggaagag
ctgatcgggcaagacgcccggtcccgcgagcaattgccggccgaggagctgttccgccgt
ttcttctcgcgccagacgggcgggggagagccggatgcggagacggttcggctgtttctg
gagctgatcgcggaagaggacgaatcggcggcggccgaggacggaacggaagaaggcacg
gaagcacaagcgggaggtgagggcgcatga
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