Paenibacillus lycopersici: GXP70_10780
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Entry
GXP70_10780 CDS
T07013
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
plyc
Paenibacillus lycopersici
Pathway
plyc00220
Arginine biosynthesis
plyc00240
Pyrimidine metabolism
plyc00250
Alanine, aspartate and glutamate metabolism
plyc01100
Metabolic pathways
plyc01110
Biosynthesis of secondary metabolites
plyc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
GXP70_10780 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
GXP70_10780 (carB)
00220 Arginine biosynthesis
GXP70_10780 (carB)
Enzymes [BR:
plyc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
GXP70_10780 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp
ATPgrasp_Ter
GARS_A
ATP-grasp_5
ATP-grasp_4
CoA_binding_2
PA
Motif
Other DBs
NCBI-ProteinID:
QHT60377
UniProt:
A0A6C0FU63
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All DBs
Position
2483815..2487033
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AA seq
1072 aa
AA seq
DB search
MPRNNKLKKILVIGSGPIVIGQAAEFDYAGTQACQALKEEGYEVVLINSNPATIMTDTNM
ADKVYIEPITLEFVTQIIRQERPDGLLPTLGGQTGLNMAVALARAGVLERENVQLLGTQL
TAIEKAEDRDLFRDLMRELEQPVPDSVIVTTVEEAVTFANEIGYPIIVRPAYTLGGTGGG
ICGDESELRDTVASGIRYSPISQCLIEKSIAGMKEVEYEVMRDANDNCIVVCNMENFDPV
GVHTGDSIVVAPSQTLSDREYQMLRSASLKIIRALNIEGGCNVQFALDPFSYQYYVIEVN
PRVSRSSALASKATGYPIAKMAAKIAIGYTLDEIVNPVTGQTYACFEPTLDYIVSKIPRW
PFDKFTTANRKLGTQMKATGEVMAIGRTFEESMHKAVRSLEIGTHRIHLKDAAELSDDVL
RLRLEKPDDERMFLVAEAFRRGYQLQDVQDITNIDWWFLDKIEGIVAFEDQLRRASVLSK
ELLYQAKRKGFSDRSIAEIRREGGQTTHTDEYDIRAYRLEQGLKPVYKMVDTCAAEFEAT
TPYYYSTYEVENEVTETDKQKVLVLGSGPIRIGQGIEFDYSTVHAVWAIQKAGYEAVIIN
NNPETVSTDFSTSDRLYFEPLFFEDVMNVIEQENPIGVIVQFGGQTAINLAAPLTKAGVR
ILGSSLESIDAAEDRKKFEALLRELNIPQPQGSTVTSVDEAVAVAQGLGYPVLVRPSYVL
GGRAMEIVYSDEELLTYMVQAVKINPEHPVLIDRYMLGKEAEVDAICDGETVLIPGIMEH
VERAGVHSGDSIAVYPPQSISKELQDKMIDITIKIARGLNVIGLVNIQFVIFQDEVYVIE
VNPRSSRTVPFLSKVTNIPMANLATQAILGTKLADLGYTEGLWPEEEYVSVKVPVFSFAK
LRRVDPTLTPEMKSTGEVMGRDQNYAKALYKGLVGAGMRIPPTGAIIATVADKDKPEAIE
ILRGFYELGYNIIATGGTATALEEAGLRVKRVNKLSEGSPNILDLIRDGQAHFVVNTLTK
GKTPERDGFRIRREAVENGVVCMTSLDTVRALLNMLEAINFSSRPMPVIAQK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgcccagaaataataagctgaagaaaattctcgttatcggttccggcccgatcgttatc
ggccaagcggccgagttcgactatgccggcacgcaagcttgccaagcgctcaaagaagaa
ggctacgaggttgtgctcatcaacagcaacccggcgacgatcatgaccgacacgaacatg
gcggacaaagtctacatcgagccgatcacgcttgaattcgttacccaaatcatccgccag
gagcgcccggacggcctgctgccgacgctcggcggtcaaaccggcctgaacatggcggtc
gcgctggcacgcgctggcgtactggaacgcgagaacgtgcagctgctcggcacgcagctg
acggcgatcgagaaagcggaagaccgcgacctgttccgcgacctgatgcgcgagctggaa
cagccggtgccggatagcgttatcgtcacgacggtcgaagaagcggtcacgttcgccaat
gagatcggctacccgatcatcgttcgtccggcgtacacgctcggcggaacgggcggcggc
atctgcggcgacgagagcgagctgcgcgacacggtcgcctccggtatccgttacagcccg
atcagccagtgcctcatcgagaaatcgatcgcgggcatgaaagaagtggaatacgaagtc
atgcgcgacgcgaacgataactgcatcgtcgtgtgcaacatggagaacttcgacccggtg
ggcgtacataccggcgattccatcgtcgtggcgccaagccaaacgctgtccgaccgcgag
taccaaatgctccgttcggcatcgctcaagattatccgcgcgctgaacatcgaaggcggc
tgcaacgtacagttcgcgctcgatccgttcagctaccaatattacgttatcgaagtgaat
ccgcgcgtcagccgctcttcggcgctcgcatccaaagcgacgggctatccgatcgccaag
atggccgcgaaaatcgccatcggttacacgctggacgaaatcgtcaacccggtaacggga
caaacttacgcttgcttcgagccgacgctggactacatcgtctccaaaatcccgcgctgg
ccgttcgataaattcacgaccgccaaccgcaagctgggcacgcaaatgaaagcgaccggc
gaagtgatggcgatcggccgcacgttcgaagaatcgatgcacaaggcagtccgctcgctg
gagatcggcacgcaccgcatccacttgaaggatgccgccgagctgtccgacgacgtgctg
cgcctgcgcctcgagaagccggacgacgagcgcatgttcctcgtggcggaagcgttccgc
cgcggctatcagctgcaggacgttcaggacatcacgaacatcgactggtggttccttgac
aagatcgaagggatcgtcgcgttcgaagatcagcttcgccgcgcaagcgtgctgtcgaag
gagctgctgtaccaagcgaagcgcaaaggcttctccgaccgttccatcgccgagatccgc
cgcgaaggcggacagacgacgcacacggacgagtacgacattcgcgcgtaccgtctggag
caaggcctgaagccggtgtacaaaatggtcgatacgtgcgccgcggagttcgaagcgacg
acgccttactactactcgacgtacgaggtcgagaacgaagtaacggaaaccgacaagcag
aaggtgctcgtgctcggctccggcccgatccggatcggccaaggcatcgagttcgactac
tccaccgtgcatgcggtgtgggcgatccagaaggccggctacgaagcggtcatcatcaac
aacaacccggagacggtatcgacggacttcagcacgtccgaccgcctgtacttcgagccg
ctcttcttcgaggacgtcatgaacgtcatcgagcaggagaacccgatcggcgttatcgtg
cagttcggcggacaaacggcgatcaacctggcggctccgctgacgaaagccggcgtgcgc
attctcggttcgagcctcgagagcatcgacgcggccgaagaccgcaagaagttcgaagcg
ctgctgcgcgagctgaacatcccgcagccgcagggctcgacggtaacgtcggtcgacgaa
gcggttgccgttgcgcaaggcctcggctacccggtactcgttcgcccgtcgtacgtcctc
ggcggacgcgcgatggaaatcgtctactccgacgaagagctgctgacgtacatggtgcaa
gcggtgaaaatcaatccggagcatccggttctgatcgaccgctacatgctcggcaaagaa
gcggaggtcgacgcgatctgcgacggcgagaccgtcctgatcccgggcatcatggagcat
gtcgagcgcgcgggcgttcactccggcgactcgattgcggtatacccgccgcaatcgatc
tcgaaagagctgcaggacaagatgatcgacattacgatcaagatcgcgcgcggtctgaac
gtcatcggtctcgtcaacatccagttcgtcatcttccaggacgaagtgtacgtcatcgag
gtaaacccgcgttcctcgcgtacggttccgttcctgagcaaagtgacgaacattccgatg
gcgaacctggcgacgcaggcgattctcggcacgaagctggcggatctcggctataccgaa
gggctgtggccggaggaagagtacgtgtcggttaaagtgccggtgttctccttcgcgaaa
ctccgccgcgtcgaccctacgctcacgcccgaaatgaaatcgacgggcgaagtcatggga
cgcgatcagaattacgcgaaagcactgtataaaggccttgtgggcgcaggcatgcgcatt
ccgcctacgggcgcgatcatcgcgacggtggccgacaaggacaagccggaagcgatcgag
attctgcgcggcttctacgagctgggctataacatcatcgcgacgggcggcacggcgacg
gcgctggaagaagcgggtctgcgcgtgaaacgcgtgaacaagctgagcgaaggctcgccg
aacatcctggatctcatccgcgacggccaggcgcacttcgtcgtcaacacgctgacgaaa
ggcaaaacgccggagcgcgacggtttccgtatccgccgcgaagcggtcgagaacggcgtc
gtctgcatgacctcgctcgatacggtacgcgccctgctcaacatgctggaagcgatcaac
ttctcctcgcgtccgatgccggtcatcgcgcagaaataa
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