Paenibacillus lycopersici: GXP70_10875
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Entry
GXP70_10875 CDS
T07013
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
plyc
Paenibacillus lycopersici
Pathway
plyc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plyc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GXP70_10875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plyc03400
]
GXP70_10875
Enzymes [BR:
plyc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GXP70_10875
DNA repair and recombination proteins [BR:
plyc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GXP70_10875
Prokaryotic type
GXP70_10875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
UPA_SH3BP4
Motif
Other DBs
NCBI-ProteinID:
QHT60390
UniProt:
A0A6C0G1G9
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All DBs
Position
2504261..2504980
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AA seq
239 aa
AA seq
DB search
MPLPSIDNDWSAVLRSEMEQPYFQQLLGTLAAQYAEGNVYPAQSAIFNAFRYTAYAEAKV
VILGQDPYHGPGQAHGLSFSVLPGVKKPPSLLNMLKELQSDLGCEMPDHGCLVTWARQGV
LLLNTVLTVRDGEAASHQGLGWERFTDRVIAELNKRQKPIVFVLWGKHAQAKEKLIDTAR
HAVIASAHPSPLSARRGFFGSRPYSAINACLRDFGVSEIDWQLPPLAALEAAAAAAGKA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgccattaccatccattgacaatgattggtcggccgtcttgcgatccgagatggaacag
ccgtactttcaacaactgctcggcacgcttgcggctcagtatgcggaggggaacgtgtac
ccggcccagtccgcaatcttcaatgcgttccgctataccgcgtatgccgaagcgaaggtc
gtcattctgggccaggatccgtatcatggcccgggtcaggcgcacggactcagcttctcg
gtgctgcccggcgtgaagaagccgccatcgctgctcaatatgctgaaggagctgcagagc
gatcttggctgcgagatgccggatcacggctgtctggtgacctgggcgcggcagggcgtg
ctgttattgaatacggtgttgaccgttcgagacggtgaagcggcttcgcatcaggggctg
ggctgggaacggtttacggatcgcgtcatcgccgagctgaacaagcggcagaagccgatt
gtcttcgtgctctggggcaagcatgcgcaggcgaaagaaaagctgatcgacacggcgcgc
catgcggttatcgcttcggcgcatccgagcccgctgtctgcgcgtcgtggcttcttcggc
agccggccctattcggccatcaatgcctgtttgcgcgatttcggcgtcagtgagatcgat
tggcaacttccgccgttggcggcattggaagcggcagcagcggcagccggaaaggcgtga
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