KEGG   Paenibacillus lycopersici: GXP70_11445
Entry
GXP70_11445       CDS       T07013                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
plyc  Paenibacillus lycopersici
Pathway
plyc00740  Riboflavin metabolism
plyc01100  Metabolic pathways
plyc01110  Biosynthesis of secondary metabolites
plyc01240  Biosynthesis of cofactors
plyc02024  Quorum sensing
Module
plyc_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:plyc00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    GXP70_11445 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GXP70_11445 (ribD)
Enzymes [BR:plyc01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     GXP70_11445 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     GXP70_11445 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam PALP Inv-AAD
Other DBs
NCBI-ProteinID: QHT60486
UniProt: A0A6C0FTJ8
LinkDB
Position
2616531..2617745
AA seq 404 aa
MCLRPLSLTCVSLITPLALLGRGVIFISATIDILNDETYMRLALDLASKAKGQTEINPVV
GCVVVREGRIVGLGAHLRRGEGHAEVHALRMAGDEAEGATAYVTLEPCSHHGRTPPCCER
LIEAKVARVVVACADPNPQVAGRGIARLREAGIAVDVGLLERESTRMNEMFNKFITTRLP
FVTMKSAMTLDGKLAAKSGDSRYVSGPQAREMAHTLRHRHMGIMVGAETALIDDPELTTR
LSVPAVHPVRIVVDSRLRLPLDARLLRGRSAPVIVLTVEGADPGRRAALEAAGAEVIACG
SGSRVDLSIAMRKLGEKEIGSILLEGGGKLNGAMLELGLVDKLLLFIAPKVIGGQMAPGV
FQFDGFEKMAHAIPFREVEVERIGGDIFLSGYPDYEAGDRSGGA
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgtgtcttcgaccgttgtctttgacctgcgtttctctaatcaccccgttggcgctactt
ggccgaggggtgatttttatttctgcgacgatcgatatattgaacgacgaaacgtacatg
cggctggcgcttgacctggcctccaaggcgaagggtcagacggaaatcaatcccgtcgtc
ggctgcgtcgtcgtccgcgaaggccgcatcgtcggcctgggcgcgcatttgcgccggggg
gaaggccacgcggaggtgcatgcgctgcgcatggccggcgacgaagcggaaggcgcgacg
gcttatgtcacgctggagccgtgcagccatcacggccggacgccgccgtgctgcgagcgg
ctgatcgaggcgaaggtcgcccgcgtcgtcgtcgcctgcgcggatccgaatccgcaggtg
gcggggcggggcatcgcaaggctgcgcgaggcgggcatcgccgtcgacgtcggactgctt
gaacgggaatcgacgcggatgaacgagatgttcaacaagttcatcacgacgcggctgccg
ttcgtcacgatgaaatcggcgatgacgctggacggcaagctggcggcgaagtccggcgac
agccggtacgtcagcggcccgcaggcgcgggagatggcgcacacgctccgtcaccggcac
atgggcatcatggtcggcgccgaaacggcgctgatcgacgacccggagctgacgacgcgc
ttgtcggtaccggccgttcatcccgtgcgcatcgtcgtcgactccaggctgcggctgccg
ctcgatgcccgcctgctgcgcggccgttcggcgcccgtgatcgtgctcacggtcgaaggc
gccgatcccggcaggcgcgccgcgctggaagccgccggcgccgaagtgatcgcctgcgga
agcggaagccgcgtcgatttgtcgatcgccatgcgcaagctcggcgagaaggagatcggc
tcgatcctgctggagggcggcggcaagctgaacggcgcgatgctggagcttggcctggtc
gacaagctgctgctcttcatcgcgccgaaagtgatcggcggccagatggcgccgggcgtc
ttccagttcgacggcttcgagaagatggcgcatgcgatcccgttccgcgaggtggaggtc
gagcggatcggcggcgacatcttcctcagcggctatcccgattatgaagccggcgaccgc
tcgggcggagcttaa

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